Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa02g0209 ATGAGTTTCCACCCTAATAATCCCCTACTTAACCTAGATCTTCTGCTTGAGCCTTCGTCTTCTTATTCTGGTTCTTCGTCTTCACCCACAGGCTCAAACATGGAGCCTCGTATATTCTCCTGCAACTATTGTCAGAGGAAGTTTTACAGCTCTCAAGCACTAGGGGGTCACCAAAATGCTCACAAGCTGGAAAGGACTTTGGCCAAGAAAAGTAGGGAGCTGATAGGTTCATCCCTTCAAGCTTATGATAATGAAGCTGCTGGATCTGACCCGATCCGGACCTCAAGTTTCAGCGGCTCGAGCCATCTTAGCCGGCGTGATGGGCCGGGGCTTGGGGGGTTCGTGAACCAAGGTCAAGGTGGAGTTAGGAGAGAGTTTAGCTATGGTTCTTCCAAAGAAATTGTTCAGGAGGATATTAACCAACTTGACCTCTCCTTAAGGCTCTGA 447 0.481 MSFHPNNPLLNLDLLLEPSSSYSGSSSSPTGSNMEPRIFSCNYCQRKFYSSQALGGHQNAHKLERTLAKKSRELIGSSLQAYDNEAAGSDPIRTSSFSGSSHLSRRDGPGLGGFVNQGQGGVRREFSYGSSKEIVQEDINQLDLSLRL 148
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa02g0209 148 PANTHER C2H2 AND C2HC ZINC FINGERS SUPERFAMILY PROTEIN 15 100 IPR044246 GO:0009788
Bisa02g0209 148 MobiDBLite consensus disorder prediction 85 116 - -
Bisa02g0209 148 ProSiteProfiles Zinc finger C2H2 type domain profile. 39 66 IPR013087 -
Bisa02g0209 148 ProSitePatterns Zinc finger C2H2 type domain signature. 41 61 IPR013087 -
Bisa02g0209 148 MobiDBLite consensus disorder prediction 89 103 - -
Bisa02g0209 148 Gene3D Classic Zinc Finger 23 90 - -
Bisa02g0209 148 FunFam Zinc finger protein 2 17 86 - -
Bisa02g0209 148 SUPERFAMILY beta-beta-alpha zinc fingers 36 66 IPR036236 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa02g0209 Bisa-ChrBisa02 3172739 3173185 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa02g0209 1 148 C2H2 Transcription Factor Family AT5G57520 48.503 3.02e-28 100
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Bisa02g0209 None None None