Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa02g0197 ATGGGTCGAGCTCCATGCTGTGACAAGGCGAACGTGAAGAGAGGGCCATGGTCTCCAGAAGAAGACGCTATCCTGAAAGCCTATATTGAAAAGCATGGAACTGGAGGCAACTGGATTGCCCTTCCTCACAAAATTGGGCTGAAGAGATGTGGAAAGAGTTGCAGACTGAGATGGCTAAATTACCTGAGGCCTAATATCAAGCATGGTGGATTTACCGAAGAAGAAGACAACATCATAAGCAGCCTTTACATTAGCATTGGAAGCAGGTGGTCCATTATTGCAGCCCAGCTACCTGGAAGGACGGACAATGACATAAAGAACTATTGGAACACCAGATTGAAGAAGAAACTACTTGGGAGGCGCAAAAAAGAAAGCATGGAGGATCAAAATTCAAATAATTCTGATCATCATACCCTAAGCCCCTCTGCTCTTGAAAGACTTCAACTTCACATGCAACTCCAAAACCCTAATTTCTCTTTCTACAATAATCCTGCCCTCTGGCCCAAGTTACATCCTTTCCAACAAAAAATTATCCAAAACAGCCTACAATCCTTGAACCCTACCTCCAATGTTACAACCACAGAGGAAAAACACGAATTTTATCAACCAACTTCTGCTAATAATAACAATATTGATGCAATTCAACAAGAAAGTGTGAAAATCAGCAGCCTGGAGAGCTCGGAGCCGGTCATCGGTACCGCCGCTAATCCGGTTGACTCGGATCGGGTTGAGCCGTTTGATGTGGGACCTGATCAGGTTTCTGCACTGCAGGCTGAACTTGATGACATTCTGAACAACAATAGTTCAAGATTAATGGGTGATTACGTGGCACAGCAGGAAGAGCAGACAGCTGAATTAATAATGTATGATTGTTTCGGAGAGATGAATGGTTCATCAAAGGACAACTTGATGATGTGGTGGTCGGGTGATTTTGATGCCAAGTCAGCATCAGCGAACTCTTGGGATTCAACTGCAACTGCTAGTGCTACCACCATTAATCCTCCTGCTCTTCAGCAAGATGATGGAATTATGTTTCAAGATTATGAACTAGGTTATATTTTGTAG 1065 0.4347 MGRAPCCDKANVKRGPWSPEEDAILKAYIEKHGTGGNWIALPHKIGLKRCGKSCRLRWLNYLRPNIKHGGFTEEEDNIISSLYISIGSRWSIIAAQLPGRTDNDIKNYWNTRLKKKLLGRRKKESMEDQNSNNSDHHTLSPSALERLQLHMQLQNPNFSFYNNPALWPKLHPFQQKIIQNSLQSLNPTSNVTTTEEKHEFYQPTSANNNNIDAIQQESVKISSLESSEPVIGTAANPVDSDRVEPFDVGPDQVSALQAELDDILNNNSSRLMGDYVAQQEEQTAELIMYDCFGEMNGSSKDNLMMWWSGDFDAKSASANSWDSTATASATTINPPALQQDDGIMFQDYELGYIL 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa02g0197 354 Gene3D - 7 68 - -
Bisa02g0197 354 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 62 IPR017930 -
Bisa02g0197 354 FunFam Transcription factor RAX3 7 68 - -
Bisa02g0197 354 CDD SANT 71 111 IPR001005 -
Bisa02g0197 354 SMART sant 67 115 IPR001005 -
Bisa02g0197 354 SMART sant 13 64 IPR001005 -
Bisa02g0197 354 MobiDBLite consensus disorder prediction 119 139 - -
Bisa02g0197 354 FunFam Transcription factor MYB36 70 138 - -
Bisa02g0197 354 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 63 117 IPR017930 -
Bisa02g0197 354 ProSiteProfiles Myb-like domain profile. 9 62 IPR001005 -
Bisa02g0197 354 SUPERFAMILY Homeodomain-like 11 109 IPR009057 -
Bisa02g0197 354 CDD SANT 16 62 IPR001005 -
Bisa02g0197 354 PANTHER OS09G0431300 PROTEIN 1 225 - -
Bisa02g0197 354 Gene3D - 70 141 - -
Bisa02g0197 354 ProSiteProfiles Myb-like domain profile. 63 113 IPR001005 -
Bisa02g0197 354 Pfam Myb-like DNA-binding domain 69 111 IPR001005 -
Bisa02g0197 354 Pfam Myb-like DNA-binding domain 14 62 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa02g0197 Bisa-ChrBisa02 3024980 3027464 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa02g0197 1 180 MYB Transcription Factor Family AT5G57620 73.711 1.92e-99 296
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Bisa02g0197 Myb_DNA-binding 4e-14 CL0123