Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa02g0177 ATGGATTCGTCTTTAGAGGGTGTCACACTTGATCCATCTAAGTGCAGTAAGTTGAGTATGGAAGAAAAAAGAGAGCTTGTCTATGAAATATCTCAGTGGTCACATGGTGCATCAGAGATGTTACAGTCATGGAGTCGACAAGAGATTTTGAAAATCCTGTGTGCAGAGATGGGAAAAGAAAGGAAGTATACTGGTTTGACAAAGTTGAAAATCATAGAAAATCTTCTAAAAATTGTTTCTGAAAAGAAATCCGGAGGCCAAGAAGTTGCAACAGACCTTGAACCACTTTCTCCTCCGGCACATGGCCAGAAACCTGCTAAAAGGCAGAGAAAAACAGAGAATCCATCTCGATTACCTCTTTCAGTAAACAATGGTTTAGTCACTAATGGTGGTGGAGATGTAGGTGGTAGTAGTACCATATACTGCAAAAATTCAGCTTGCAAAGCTACCCTAAGTCAATCGGATGTATTTTGCAAAAGATGCTCGTGCTGCATTTGTCATAGATATGATGACAACAAAGATCCTAGCCTGTGGTTAATATGTAACTCTGAGCCTCCATTTCTAGGTCTTTCTTGTGGCTTGTCATGCCATCTTGAGTGTGCTTTAAAACATGATGGTTCTGGTATTGCCAGAGATGGAGAGCATCCAAAACTTGATGGTGGTTTCTACTGTGTCTCTTGTGGAAAAGTAAATGATTTACTCGGATGCTGTCGAAAACAACTTAAGGTAGCAAAGGACACCAGACGTGTGGACATACTCTGCTATCGCGTCTCCTTAAGCCAAAGACTTTTACAAGGGACTGAAAGGTATACAAAACTCTATGAAATCATCGATGAAGCTGTGAAGAAACTTGAACCTGATGTTGGCCCATTGACTAGTTCACCAGTGAAGATTGGTAGGGGTATTGTGAACAGGCTTTCATCGGGACCAGAGGTTCAGAAACTCTGTGGTTTTGCTCTGGAATCACTGGATTCACTGCTTTCTAAAAGGATCTTGCCTCCCTCACCCAGTCCAACAATTCAAGATATAAAATTGATTGCTCCAAATATGGTGGCGTTTGAAGATGTTATGGCAACATCCCTTACTGTAGTTTTGGGTTCTGAAGATCCTTGTGGGGAAAATATTATTGGTTACACCTTGTGGCATCGCAAAGCTCATGGTATTGACTATCCATTGGAACCGACTTGCACATTGCTTTTGCCAGAAAGAAAGTTCAGTATCAGGGCACTAATGCCGGCCACAGAATACATTTTCAAAGTTGTTGCCTTCAATGACTTAAGGGAGTTGGGCATGTGTGAAGTTCATGTTTCAACTGAACATGGCGATGATGAAGCACCTAACTGCTCAGCAACAGAGAGAAGTCAGAGCCCAGTAACTAACTGTAGCAGCCTTTCCAATCCTTCTTCGGTTGAAGATGAAACTAATAACAGTAATCCATATAGTGACCAGACTGATAATCGAGAGGATAATTATCTTACTTATCACAAGGACACTGACAAGCTTGCCTCTGGAATTTTATCTAATGATGCCGTTAACTGTTGCAGCATAGGTGAAGATGGACTTCCAGCAGATGCAGATTCTTTGTCAGACAAGGAACATGCTGTAGGAATGGCTGGCTCCATACCTGGTTCAGATGTGCTAAAGCTTGAAAACAAGCACTCATCAGAAGAGCAAGTCACTGAGGACATGAGCACTGATGATGGGCTTAATTCCCCTGCTCAGACTGGGAGGGAGTGTGTGCCATTAAGTAGTTCAGAAGCAGGCCTTCCTATCACTCCATGCAAGTTGGAAATGCTGAAGGATGGACCAGGAAGAAACGGGAGATCTAAATCCAGTGGCAAGGATCAAGAGAGTGGGCCTGGGAAGAGACAAGGACCCCAGGATGGGAGCACATCCAAGAGAAGTGGAGAAAGGGCAGTTGAGGCTTGTGCTGCCAATGGTTTTTCGGATAGGGATTTTGCGTATTATGTGAAGGTGATTAGATGGCTAGAGTGTGAAGGACATATAGAGAAGAACTTCAGGCAGAAATTTCTGACTTGGTACAGCTTAAGAGCAACGCCTCAAGAAGTAAGGGTTGTCAAAGTGTATATCGATACATTTCTTGAAGATCCAGCATCTCTTGCTGAGCAGCTCGTGGACACATTCTCAGAATGTATATCAAGCTCGAGCAAAAGAACATCTGTGGTGCCGGCTGGGTTCTGCATGAAGCTTTGGCATTGA 2220 0.4311 MDSSLEGVTLDPSKCSKLSMEEKRELVYEISQWSHGASEMLQSWSRQEILKILCAEMGKERKYTGLTKLKIIENLLKIVSEKKSGGQEVATDLEPLSPPAHGQKPAKRQRKTENPSRLPLSVNNGLVTNGGGDVGGSSTIYCKNSACKATLSQSDVFCKRCSCCICHRYDDNKDPSLWLICNSEPPFLGLSCGLSCHLECALKHDGSGIARDGEHPKLDGGFYCVSCGKVNDLLGCCRKQLKVAKDTRRVDILCYRVSLSQRLLQGTERYTKLYEIIDEAVKKLEPDVGPLTSSPVKIGRGIVNRLSSGPEVQKLCGFALESLDSLLSKRILPPSPSPTIQDIKLIAPNMVAFEDVMATSLTVVLGSEDPCGENIIGYTLWHRKAHGIDYPLEPTCTLLLPERKFSIRALMPATEYIFKVVAFNDLRELGMCEVHVSTEHGDDEAPNCSATERSQSPVTNCSSLSNPSSVEDETNNSNPYSDQTDNREDNYLTYHKDTDKLASGILSNDAVNCCSIGEDGLPADADSLSDKEHAVGMAGSIPGSDVLKLENKHSSEEQVTEDMSTDDGLNSPAQTGRECVPLSSSEAGLPITPCKLEMLKDGPGRNGRSKSSGKDQESGPGKRQGPQDGSTSKRSGERAVEACAANGFSDRDFAYYVKVIRWLECEGHIEKNFRQKFLTWYSLRATPQEVRVVKVYIDTFLEDPASLAEQLVDTFSECISSSSKRTSVVPAGFCMKLWH 739
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa02g0177 739 MobiDBLite consensus disorder prediction 439 487 - -
Bisa02g0177 739 MobiDBLite consensus disorder prediction 448 487 - -
Bisa02g0177 739 ProSiteProfiles Fibronectin type-III domain profile. 347 442 IPR003961 GO:0005515
Bisa02g0177 739 MobiDBLite consensus disorder prediction 87 122 - -
Bisa02g0177 739 SUPERFAMILY Fibronectin type III 347 426 IPR036116 GO:0005515
Bisa02g0177 739 MobiDBLite consensus disorder prediction 564 581 - -
Bisa02g0177 739 Pfam PHD - plant homeodomain finger protein 142 261 IPR032881 -
Bisa02g0177 739 PANTHER VIN3-LIKE PROTEIN 2-RELATED 8 739 IPR044514 GO:0010048|GO:0040029
Bisa02g0177 739 CDD FN3 347 425 IPR003961 GO:0005515
Bisa02g0177 739 Gene3D Immunoglobulins 346 444 IPR013783 -
Bisa02g0177 739 MobiDBLite consensus disorder prediction 551 637 - -
Bisa02g0177 739 CDD PHD_VIN3_plant 162 227 - -
Bisa02g0177 739 MobiDBLite consensus disorder prediction 601 617 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa02g0177 Bisa-ChrBisa02 2761442 2766139 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa02g0177 1 486 PHD Gene Family AT4G30200 53.846 2.38e-168 496