Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa02g0175 ATGAGGTATATTCGCACCAACAGCTTCAAGAGGCTCTTCTCCCTGAAATGGCGCAGTTTCGAGGAAGAAATTCGCACTAGCAACGACTTGCAGATTCTTCCACTCCCAGACCAAGCTTCCCCGAAACCCACTTGGAAATGCTTCTCCTACGAGGAACTCTTCGACGCCACCAATGGCTTCACCTCAGAGAACGTGGTCGGAAAAGGAGGGTACGCAGAGGTTTACAAGGGGACATTGAAGGACGGAGACGAGATTGCTGTGAAAAGGCTCACGAGAACTTCGAGTGACGAGAGGAAAGAGAAGGAGTTCTTGACTGAAATTGGCACAATCGGTCACGTTCACCATCCAAACGTGTTGCCTCTTTTAGGTTGTTGTATCGACAAGGGGCTTTACCTCGTCTTCGAACTCTCCTCCAAAGGCACTGTCGCGTCTCTTCTTCATGATCAAAACTTGCCTCCCATGGACTGGAAAATCAGGCATAAGATTGTCATAGGGACCGCACGTGGCCTCCACTACTTGCACAAAGGCTGCAAGAGGAGGATAATTCACAGAGACATCAAGGCTTCCAACATTCTCTTGTCTGCAGATTATGAACCACAGATTTCAGATTTTGGACTGGCAAAGTGGCTTCCAAATCAATGGACTCACCATTCAATAGCCCCAATAGAAGGCACATTCGGGCATCTGGCACCAGAGTACTATTTGCATGGAATAGTGGATGAGAAAACCGATGTGTTTGCGTTTGGGGTTTTCGTGCTCGAAGTCATATCAGGAAGGAAACCAGTGGACGGTTCTCACCAAAGCTTACACAATTGGGCTAAGCCATTGTTGAACAAAGAGGAGGTAGAGAAGCTGGTGGATCCAAGGCTAGAAGGGGCCTATGATTTAACCCAATTAAAAACACTCGCCTTTGTAGCCTCTCTGTGTATCCGAGCTTCTTCAACTTGGCGTCCTAACATGAGCCAGGTATTGGAGGTAATGGAGGAGGGAGAAATGGAGAAAGAGAAATGGAAAATGCCAGAGGAAGAAGAAGAGCAAGAGGAGGAGTTCTGGGGCTTTGAGGATTTGGAGTATGAATATCAAAGTTCCTTCTCTTTGTCTCTTCCTAACTCCACTGCTAGCCCTTGA 1128 0.4752 MRYIRTNSFKRLFSLKWRSFEEEIRTSNDLQILPLPDQASPKPTWKCFSYEELFDATNGFTSENVVGKGGYAEVYKGTLKDGDEIAVKRLTRTSSDERKEKEFLTEIGTIGHVHHPNVLPLLGCCIDKGLYLVFELSSKGTVASLLHDQNLPPMDWKIRHKIVIGTARGLHYLHKGCKRRIIHRDIKASNILLSADYEPQISDFGLAKWLPNQWTHHSIAPIEGTFGHLAPEYYLHGIVDEKTDVFAFGVFVLEVISGRKPVDGSHQSLHNWAKPLLNKEEVEKLVDPRLEGAYDLTQLKTLAFVASLCIRASSTWRPNMSQVLEVMEEGEMEKEKWKMPEEEEEQEEEFWGFEDLEYEYQSSFSLSLPNSTASP 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa02g0175 375 Pfam Protein tyrosine and serine/threonine kinase 63 325 IPR001245 GO:0004672|GO:0006468
Bisa02g0175 375 FunFam Putative receptor-like serine/threonine-protein kinase 138 352 - -
Bisa02g0175 375 SMART serkin_6 60 327 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa02g0175 375 ProSiteProfiles Protein kinase domain profile. 60 332 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa02g0175 375 Gene3D Phosphorylase Kinase; domain 1 36 136 - -
Bisa02g0175 375 FunFam Putative receptor-like serine/threonine-protein kinase 28 136 - -
Bisa02g0175 375 SUPERFAMILY Protein kinase-like (PK-like) 37 327 IPR011009 -
Bisa02g0175 375 Gene3D Transferase(Phosphotransferase) domain 1 138 353 - -
Bisa02g0175 375 PANTHER OS08G0249100 PROTEIN 36 357 IPR046958 -
Bisa02g0175 375 ProSitePatterns Protein kinases ATP-binding region signature. 66 88 IPR017441 GO:0005524
Bisa02g0175 375 ProSitePatterns Serine/Threonine protein kinases active-site signature. 181 193 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa02g0175 Bisa-ChrBisa02 2744769 2749519 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa02g0175 48 336 Trihelix Transcription Factor Family AT4G32710 46.358 5.81e-73 239
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Bisa02g0175 PK_Tyr_Ser-Thr 1.7e-41 CL0016