LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Bisa02g0146	ATGGGGATGGGGTCATCGCAGGCTATGGTGAGCATGTTGTTGGTGCAAATTTTCGCAACAGGAATGCAGCTACTTTCAAGAGTGGTATTGGCTAAGGATACTTTCGTATTTGCACTTATTGCCTATCGTCATGTCATTGCCACTCTTTGCGTTGTCCCTTTTGCTTTATACTTCGAAAGGGGCCAGCCAAAGAACTTCAGTTTGTCAGCTTGGTTATGGCTCTTCCTTAATGCTTTATTTGGGATAGTAATGGCTATGGGATTCTTCTATTATGGCCTGCGAGACACTTCAGCTACTTACGCTGTCAACTTCCTCAACTTGATTCCCATATTCACCTTCATTTTCTCCATCATATGTAGGATAGAGAAACTAGGGCTAAAAACATTGGCTGGTAAAGCCAAGATAATAGGGGCAATTGCGTGTGTTGGAGGGGCATTAACTACTGGTCTTTACACAGGAAAACAATTTTATATTGGTCACCATCATCATCAACACTCTACTTCTGCTGCATCACACAAAACTAACATGCTTCGAGGCACTATATTTCTAGTTGCTAGTTGTTTGTCATATACAACATGGTACATTGTGCAAGTGAGGCTGAAGAAAGTGTTTCCATTGAACTATTGGACAACAATGCTGACATGTGCAATAGGAACAATTCAATCAGTGCTAGTAGGGTTATGCATTGACCATAGTAAAGCTTCTTGGACTTTAGGGTGGGATATGCAATTGCTCACTATAGTATACTCGGGAGTATTGGGTACAGCTGCTACATTTTGCTTAGTATCTTGGGCAATCTCAATGAAAGGACCTACTTATCCCCCGATGTTCAACCCACTAGTTCTTATTTTTGTGGCTGTACTAGAAGCAATTTTGCTGGGTGAATCCTTGAGTGTTGGAAAAGTGACAGGCATGGTTTTGATCATATTTGGCATCTACCTCTTTTTGTGGGGCAAGAAAAAGGAGATACAAAGCTTGTCTCAACCAAATGGAGCTATGGATAAAGTATCCAAAGACATAGTTGTTGAGTCTTCTGAGTTACAGTCAACTACCTTAGCAATGCCATGTTCTTCAACTACCACTACAATTATCGACATTGAAGAACCGACATCCAAAAAGGAACTTGAATCCTAA	1134	0.4092	MGMGSSQAMVSMLLVQIFATGMQLLSRVVLAKDTFVFALIAYRHVIATLCVVPFALYFERGQPKNFSLSAWLWLFLNALFGIVMAMGFFYYGLRDTSATYAVNFLNLIPIFTFIFSIICRIEKLGLKTLAGKAKIIGAIACVGGALTTGLYTGKQFYIGHHHHQHSTSAASHKTNMLRGTIFLVASCLSYTTWYIVQVRLKKVFPLNYWTTMLTCAIGTIQSVLVGLCIDHSKASWTLGWDMQLLTIVYSGVLGTAATFCLVSWAISMKGPTYPPMFNPLVLIFVAVLEAILLGESLSVGKVTGMVLIIFGIYLFLWGKKKEIQSLSQPNGAMDKVSKDIVVESSELQSTTLAMPCSSTTTTIIDIEEPTSKKELES	377

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Bisa02g0146	377	Pfam	EamA-like transporter family	178	316	IPR000620	GO:0016020
	Bisa02g0146	377	Pfam	EamA-like transporter family	9	142	IPR000620	GO:0016020
	Bisa02g0146	377	SUPERFAMILY	Multidrug resistance efflux transporter EmrE	240	321	-	-
	Bisa02g0146	377	Gene3D	-	217	321	-	-
	Bisa02g0146	377	PANTHER	WAT1-RELATED PROTEIN	8	328	IPR030184	GO:0016020\|GO:0022857
	Bisa02g0146	377	SUPERFAMILY	Multidrug resistance efflux transporter EmrE	42	142	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Bisa02g0146	Bisa-ChrBisa02	1827721	1831150	Dispersed/Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Bisa02g0146	5	377	Nodulin-like Gene Family	AT5G07050	31.008	6.98e-66	213