Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa02g0138 ATGAGGGATAGTGAGAAGAATCTAAATAACAGAGGATCTAGAAAATCCAGTCATTCAAAGGCACAAACTGAGTTAAAGCCAAGCTCATCATTGAGATTCAAAACTAGTAGTTCAAAGTCCCAAGGGAAGAAGCATAAATTGAAATCAAAATCTCATGCATGTAGAGTTGGTGCAAACATATCAAGGAGGACAGTCACTGACTCTTCTAACAAGGACCCAAGCAAGGATTCTTCAAATATAAAATTGATCATTAGACGAAGACTGGATAAAACCAATGGAAATTCATCACAGAAGCTCTCTTCATCAACACTACAAGGCGAAGAAGTTTCTCTTAGTTCTAGGAAAGAAGGGAAAGATATTGACGGGGAGGTAAAAATTCAAAAACTTAGAAAGAGAAGGCGAAAAAAGAAAAGGCAAAGACATAATGTGGATCTTGATGATGCTTCACGCCTGCAGAGGAGAATAAGGTATCTTTTAATCAAAATGAAGTTGGAGCAGAACCTCATCGATGCTTACTCTGGAGAAGGTTGGAAAGGTCAAAGTCGAGAAAAGATAAGACCAGAAAAGGAGCTGCAAAGAGCTCAGAAGCAGATTTTACAATGTAAACTTAGTATTCGTGATGCAATTCGCCAGTTGGATTCTCTTAGTTCAGTGGGTAGCATTGAAGGTTCTGTCATTGCTCCAGATGGATCTGTTTATCATGAACATATATTCTGTGCAAAGTGCAAATTGCGTGAAGCTTTCCCAGATAATGATATTATATTATGTGATGGCACATGCAATCGTGCTTTTCACCAAAAGTGTCTTGATCCTCCTTTGGACACTGAAAATATTCCTCCTGGAGACCAAGGCTGGTTTTGCAAGCTTTGTGACTGTAAGATGGAAATGCTAGAGGCAATAAATGCCCATCTTGGAACTCACTTCTCCTTGGACAGCGCTTGGCAGGATATATTCAAGGAAGAAGCTTCTATGCCCGATGGTGATACTAGATTACTGAATCCAGAAGAAGAATGGCCATCAGATGATTCTGAGGATGATGATTATAATCCAGTGAGGAGAGAAGACAGCCACAGTATCAGCACAGAAGGAATTGATGATGATGCATATGAAGATTTAAGCAGTTCTACCAGTCTATGTACTTCAGACGGTGGATGTTCTCCAGGAAAGGAAGACATGGCCCAAGAATTTTTCTCTGTAAATAGCTGCGTAGATTCTGATGAATCTGGGGAGATAGCATGTGGCCGGAGGCAGCGAAAAGCCGTTGACTACAAGAAACTTTATTATGAAATGTTTGGGAAAGATGCTCCTGCACTTGAACAAGTTAGCGAAGATGAAGACTGGGGTCCTGGCAAAAGAAAGCGAAGAGAGAAGGAATCTGATGCTGCTAATACTCTGATGACTCTCCATGAAACTGAGAATACATATCCCAATAATGAGCAGGACGTGATAAGGGATGTTTCTTCAGGCAGCCAAATTAAAAGGCCTTGTTTCAGGCTTCCGCGTGATACAGTTGAGAAACTTCGCCAAGCTTTTGCAGAGAATGAACTTCCTCCAAGATCTGTGAAGGAGGGTCTTTCAAAAGAGTTGGGACTGGATGCTGATAAGGTTAGCAAATGGTTCAAAAATGCACGTTACCTAGCACTTAAAACCAGAAAGCAAGCAGGAGGAGACGAAGAACAGCTTGAAAGCGTCACTTCTAGAACCCAAAATGATTCTAGTTTACAAAATCTGGAGAAAGAGCAGTTGACGTCAAAAGAAACTTCGGCTCATCCCCAGAAGAATGTTAAAAAGGGCAGCCATAGAAAGCACTTGAAGCCATGTAGCCGCAAGCCTTTGAAGAAAAGGAAACAAGAAATATCTCCACCTCAATCAAGGGAAAATGGCAACAAGGATTTAGTGGAGTTCACAGATGATGTGAGCTTGAAGAAGCTGTTGAAAGCAACAAGGAGGAAGAGGGTAAGTTATGTGTTTGAAGGAGACCCTGAGGCAGCAGAGTCAGAATTGGAAAGACTTAGCAAACTGAAGATTAGAGTAGACAGTATGAAGCAAAAATTACTTGAAATACAAAATTACAGGGCAAAGGATTCTGATGAACCCCAATCCAAAGAACCATCAGTTATATATGTACCTGTAGCTGAGTTAAGAGAAAAAAGTTGA 2157 0.4075 MRDSEKNLNNRGSRKSSHSKAQTELKPSSSLRFKTSSSKSQGKKHKLKSKSHACRVGANISRRTVTDSSNKDPSKDSSNIKLIIRRRLDKTNGNSSQKLSSSTLQGEEVSLSSRKEGKDIDGEVKIQKLRKRRRKKKRQRHNVDLDDASRLQRRIRYLLIKMKLEQNLIDAYSGEGWKGQSREKIRPEKELQRAQKQILQCKLSIRDAIRQLDSLSSVGSIEGSVIAPDGSVYHEHIFCAKCKLREAFPDNDIILCDGTCNRAFHQKCLDPPLDTENIPPGDQGWFCKLCDCKMEMLEAINAHLGTHFSLDSAWQDIFKEEASMPDGDTRLLNPEEEWPSDDSEDDDYNPVRREDSHSISTEGIDDDAYEDLSSSTSLCTSDGGCSPGKEDMAQEFFSVNSCVDSDESGEIACGRRQRKAVDYKKLYYEMFGKDAPALEQVSEDEDWGPGKRKRREKESDAANTLMTLHETENTYPNNEQDVIRDVSSGSQIKRPCFRLPRDTVEKLRQAFAENELPPRSVKEGLSKELGLDADKVSKWFKNARYLALKTRKQAGGDEEQLESVTSRTQNDSSLQNLEKEQLTSKETSAHPQKNVKKGSHRKHLKPCSRKPLKKRKQEISPPQSRENGNKDLVEFTDDVSLKKLLKATRRKRVSYVFEGDPEAAESELERLSKLKIRVDSMKQKLLEIQNYRAKDSDEPQSKEPSVIYVPVAELREKS 718
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa02g0138 718 CDD homeodomain 493 553 IPR001356 GO:0003677
Bisa02g0138 718 MobiDBLite consensus disorder prediction 61 77 - -
Bisa02g0138 718 Pfam Homeodomain 502 545 IPR001356 GO:0003677
Bisa02g0138 718 ProSiteProfiles Zinc finger PHD-type profile. 236 293 IPR019787 -
Bisa02g0138 718 PANTHER POLYCOMB-LIKE TRANSCRIPTION FACTOR 14 717 - -
Bisa02g0138 718 ProSitePatterns Zinc finger PHD-type signature. 239 290 IPR019786 -
Bisa02g0138 718 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 230 287 IPR013083 -
Bisa02g0138 718 MobiDBLite consensus disorder prediction 324 375 - -
Bisa02g0138 718 Coils Coil 191 211 - -
Bisa02g0138 718 MobiDBLite consensus disorder prediction 38 52 - -
Bisa02g0138 718 CDD PHD_PRHA_like 238 290 IPR045876 -
Bisa02g0138 718 MobiDBLite consensus disorder prediction 78 92 - -
Bisa02g0138 718 MobiDBLite consensus disorder prediction 345 364 - -
Bisa02g0138 718 MobiDBLite consensus disorder prediction 441 460 - -
Bisa02g0138 718 ProSiteProfiles 'Homeobox' domain profile. 490 550 IPR001356 GO:0003677
Bisa02g0138 718 SMART HOX_1 492 554 IPR001356 GO:0003677
Bisa02g0138 718 FunFam pathogenesis-related homeodomain protein 492 556 - -
Bisa02g0138 718 Coils Coil 664 684 - -
Bisa02g0138 718 Pfam PHD-finger 238 293 IPR019787 -
Bisa02g0138 718 MobiDBLite consensus disorder prediction 559 582 - -
Bisa02g0138 718 MobiDBLite consensus disorder prediction 594 612 - -
Bisa02g0138 718 MobiDBLite consensus disorder prediction 552 633 - -
Bisa02g0138 718 FunFam pathogenesis-related homeodomain protein-like 230 290 - -
Bisa02g0138 718 Coils Coil 711 718 - -
Bisa02g0138 718 SUPERFAMILY Homeodomain-like 485 546 IPR009057 -
Bisa02g0138 718 Gene3D - 492 557 - -
Bisa02g0138 718 MobiDBLite consensus disorder prediction 1 21 - -
Bisa02g0138 718 SUPERFAMILY FYVE/PHD zinc finger 230 295 IPR011011 -
Bisa02g0138 718 MobiDBLite consensus disorder prediction 22 37 - -
Bisa02g0138 718 SMART PHD_3 238 291 IPR001965 -
Bisa02g0138 718 MobiDBLite consensus disorder prediction 1 124 - -
Bisa02g0138 718 MobiDBLite consensus disorder prediction 93 110 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa02g0138 Bisa-ChrBisa02 1730458 1736588 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa02g0138 143 552 Homeobox Transcription Factor Family AT4G29940 59.857 1.26e-161 483
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-PHD Bisa02g0138 Homeodomain 1.1e-06 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa02g0138 02 1730458 1736588 Bisa02g0138 02 1730458 1736588 ECH