Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Bisa02g0119 | ATGAGTTTCTTGAAGGGTTCACCTCGCCATCAGAATGATATAGAGGCCGGGAGTAGCCGCTCTGACAACTTTGACGATGGGGAGGGCTCATCCGGTCCATTTGATATCACCAGCACAAAGAATGCTTCCATTGAACGACTCAAGCGATGGAGGCAAGCTGCGCTTGTGCTTAATGCTTCTCGTCGATTCCGTTACACCTTGGACTTGAAAAAAGAAGAAGAGAAGAAGCAAATATTGAGGAAAATTAGGGCACATGCACAAGCCATTAGAGCTGCATATCTTTTCAAAGAAGCTGGGCAGAGTGTGAAGGGGACTGTAATATCTCCTCCAGCTGTCCCAGGGGACTTTCCAATTGGACTGGAGCAGCTTGCATCAATTTCAAGGGATCATAAAAATGATGTCCTGCAGCAATATGGAGGGGTTAGAGGGCTGGCAGAGCCATTGAAAACCAATTTAGAAAAGGGGATCCGTGGCGACGATGCTGACTTAATAAAACGGAGGAATGCCTTTGGTTCAAACAATTATCCTCGAAAGAAAGGAAGGAGTTTTTTGATGTTTGTGTGGGATGCTTGCAAGGATCTGACCTTGGTTATATTAATGGTTGCAGCAGTGGCTTCATTGGCACTGGGAATAAAATCTGAGGGTATCGAGGAAGGATGGTATGATGGGGGAAGCATTGCATTTGCTGTGATTCTTGTAATTGTTGTTACAGCCATAAGTGATTATAAACAGTCTCTTCAGTTTCGAGATCTAAATGAGGAGAAGAGAAATATACATCTAGAGGTTATTAGAAATGGTAGAAGAGTTGAGATCTCAATATATGATATTGTTGTTGGTGACGTTATACCCCTTAATATTGGTGACCAGGTCCCTGCTGATGGAATTTTAATCACTGGGCACTCTCTTGCAATTGACGAATCAAGTATGACTGGGGAGAGCAAGATTGTTTATAAGGACTCAAAGGACCCTTTTCTGATGTCTGGATGTAAAGTTGCAGATGGCAGTGGCACTATGTTGGTTACAGGTGTTGGTATTAATACTGAATGGGGGCTACTAATGGCTAGTATATCAGAAGACACTGGTGAAGAAACGCCCTTGCAGGTACGCTTAAATGGTGTCGCCACCTTCATTGGTATTGTTGGCCTCACTGTGGCTGCTGCTGTCCTGACTGTGTTACTGGTCAGATATTTTACTGGGCATACTGAAAACGCAGATGGAAGTTCTCAGTTTAAGGCAGGGAAGACAAAAATTGGTGATGCTATTGATGGAGCGGTTAAGATAGTCACAGTTGCGGTCACCATTGTAGTGGTTGCGGTGCCTGAAGGGCTTCCTTTAGCAGTTACCTTAACACTTGCCTACTCAATGAGGAAAATGATGGCAGATAAAGCTTTGGTGAGGAGGCTTTCAGCCTGTGAGACAATGGGTTCTGCAACAACCATTTGCAGTGATAAGACTGGAACATTGACTTTGAATCAGATGACTGTGGTTGAGGCTTACGTTGGTGGGAGGAAGATTGATCCTCCTCACAACAAATCAGGGCTCTCTGATAGGCTTTGCTCTTTGGTTGTTGAAGGTGTTGCACAGAACACTAATGGCAGTGTTTACGTACCTGAGGGCGGTGACAATCTTGAGGTCTCTGGATCACCTACAGAAAAGGCAATTTTGCAATGGGGAATCCAGCTGGGGATGAATTTCGAGGCTGTCAGATCAGAGTCATCAATTATACATGTCTTTCCATTCAATTCTGAGAAAAAACGCGGGGGAGTTGCACTGCAGATGCGTGACTCTCAAATTCATGTACATTGGAAAGGTGCTGCTGAGATAGTGCTGGCCTGTTGTACAGCATATATGGATGAAAATGACCAGTTAGTAGATATGGATCAAGAGAAGATGAGGTTCTTTAAAAAAGCTATTGAAGACATGGCTGCTGGTAGTCTCCGTTGTGTTGCCATTGCATATAGATTATATGAAATGGACAATGTTCCAACTAGTGAAGAAGAACTTGCCCATTGGTCATTACCAGAGGATGCTCTTGTTTTATTGGCTATTGTTGGGCTGAAGGATCCTTGTCGAGATGGTGTCAAGAATGCAGTGCAACTTTGCCAAAAAGCTGGAGTGAAGGTACGAATGGTCACCGGTGATAATGTGCAAACTGCAAAAGCAATTGCTCTGGAATGTGGAATACTTGGTTCACCTGAAGATGCCATTGAGCCAAACATTATTGAAGGAAAAGCATTTCGTGCATTGTTAGATAAAGAGAGAGATGATATTGCTGAACAGATATTGGTTATGGGACGGTCATCTCCTAATGACAAGCTTCTGCTTGTGCAAGCATTGAGGAAGAAGGGGCATGTTGTGGCTGTAACTGGGGATGGAACTAATGATGCTCCTGCACTGCATGAGGCCGATATAGGTCTTGCAATGGGTATTCAAGGGACAGAAGTCGCTAAAGAGAGCTCTGATATCATTATTTTGGATGACAATTTTGCTTCAGTTGTGAAGGTTGTCAGATGGGGGCGTTCTGTATATGCAAATATTCAGAAATTTATCCAGTTTCAGCTTACAGTAAATGTGGCAGCGCTTGTTATTAATGTTGTTGCTGCAGTCTCCACTGGCGATGTCCCACTAAATGCAGTACAGCTTCTCTGGGTAAATCTGATTATGGATACACTTGGAGCACTAGCCTTGGCAACTGAGCCACCAACTGATCACCTAATGGATCGACCTCCAGTTGGTCGAAGAGAACCTCTCATAACAAATATCATGTGGAGAAATTTACTCATACAGGCAATGTTCCAAGTGTCTGTTTTGCTTGTACTCAATTTCCGAGGTAGGAGCATACTGGGTCTTAACAGTGACACCAACAGCCATGCTATCAAAGTGAAGAACACTTTAATTTTCAATGCATTTGTTTTCTGTCAAATCTTCAATGAATTTAATGCTCGAAAGCCAGATGAATACAACATATTTAAGGGAGTCACAAGAAACTACCTATTTATGGGGATAGTGGGATTAACTCTTGTGCTTCAGATTATTATCATTGAATTTCTGGGGAAGTTCACCAAAACAGTCAGGCTTAATTGGAAGCAATGGATCATTTCTGTTGTCATTGGATTCATCAGCTGGCCTCTTGCTGTGGTTGGGAAGTTGATACCTGTTCCAGAAACTTCTCTCAGTGACTTTTTCAGGAGATGCATTCGCAGAAGAACTCTGTAG | 3216 | 0.4316 | MSFLKGSPRHQNDIEAGSSRSDNFDDGEGSSGPFDITSTKNASIERLKRWRQAALVLNASRRFRYTLDLKKEEEKKQILRKIRAHAQAIRAAYLFKEAGQSVKGTVISPPAVPGDFPIGLEQLASISRDHKNDVLQQYGGVRGLAEPLKTNLEKGIRGDDADLIKRRNAFGSNNYPRKKGRSFLMFVWDACKDLTLVILMVAAVASLALGIKSEGIEEGWYDGGSIAFAVILVIVVTAISDYKQSLQFRDLNEEKRNIHLEVIRNGRRVEISIYDIVVGDVIPLNIGDQVPADGILITGHSLAIDESSMTGESKIVYKDSKDPFLMSGCKVADGSGTMLVTGVGINTEWGLLMASISEDTGEETPLQVRLNGVATFIGIVGLTVAAAVLTVLLVRYFTGHTENADGSSQFKAGKTKIGDAIDGAVKIVTVAVTIVVVAVPEGLPLAVTLTLAYSMRKMMADKALVRRLSACETMGSATTICSDKTGTLTLNQMTVVEAYVGGRKIDPPHNKSGLSDRLCSLVVEGVAQNTNGSVYVPEGGDNLEVSGSPTEKAILQWGIQLGMNFEAVRSESSIIHVFPFNSEKKRGGVALQMRDSQIHVHWKGAAEIVLACCTAYMDENDQLVDMDQEKMRFFKKAIEDMAAGSLRCVAIAYRLYEMDNVPTSEEELAHWSLPEDALVLLAIVGLKDPCRDGVKNAVQLCQKAGVKVRMVTGDNVQTAKAIALECGILGSPEDAIEPNIIEGKAFRALLDKERDDIAEQILVMGRSSPNDKLLLVQALRKKGHVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKESSDIIILDDNFASVVKVVRWGRSVYANIQKFIQFQLTVNVAALVINVVAAVSTGDVPLNAVQLLWVNLIMDTLGALALATEPPTDHLMDRPPVGRREPLITNIMWRNLLIQAMFQVSVLLVLNFRGRSILGLNSDTNSHAIKVKNTLIFNAFVFCQIFNEFNARKPDEYNIFKGVTRNYLFMGIVGLTLVLQIIIIEFLGKFTKTVRLNWKQWIISVVIGFISWPLAVVGKLIPVPETSLSDFFRRCIRRRTL | 1071 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Bisa02g0119 | 1071 | Pfam | Cation transporting ATPase, C-terminus | 874 | 1051 | IPR006068 | - | |
| Bisa02g0119 | 1071 | FunFam | Calcium-transporting ATPase | 683 | 834 | - | - | |
| Bisa02g0119 | 1071 | NCBIfam | calcium-translocating P-type ATPase, PMCA-type | 130 | 1053 | IPR006408 | GO:0005388|GO:0005524|GO:0016020|GO:0070588 | |
| Bisa02g0119 | 1071 | ProSitePatterns | E1-E2 ATPases phosphorylation site. | 483 | 489 | IPR018303 | - | |
| Bisa02g0119 | 1071 | Gene3D | - | 42 | 98 | - | - | |
| Bisa02g0119 | 1071 | Gene3D | - | 163 | 357 | - | - | |
| Bisa02g0119 | 1071 | Pfam | Ca2+-ATPase N terminal autoinhibitory domain | 33 | 74 | IPR024750 | GO:0005516 | |
| Bisa02g0119 | 1071 | SUPERFAMILY | Metal cation-transporting ATPase, ATP-binding domain N | 488 | 686 | IPR023299 | GO:0000166 | |
| Bisa02g0119 | 1071 | PANTHER | CATION TRANSPORTING ATPASE | 87 | 1053 | - | - | |
| Bisa02g0119 | 1071 | PRINTS | P-type cation-transporting ATPase superfamily signature | 704 | 714 | - | - | |
| Bisa02g0119 | 1071 | PRINTS | P-type cation-transporting ATPase superfamily signature | 682 | 693 | - | - | |
| Bisa02g0119 | 1071 | PRINTS | P-type cation-transporting ATPase superfamily signature | 813 | 825 | - | - | |
| Bisa02g0119 | 1071 | PRINTS | P-type cation-transporting ATPase superfamily signature | 789 | 808 | - | - | |
| Bisa02g0119 | 1071 | PRINTS | P-type cation-transporting ATPase superfamily signature | 305 | 319 | - | - | |
| Bisa02g0119 | 1071 | PRINTS | P-type cation-transporting ATPase superfamily signature | 481 | 495 | - | - | |
| Bisa02g0119 | 1071 | Gene3D | - | 189 | 1042 | - | - | |
| Bisa02g0119 | 1071 | FunFam | Calcium-transporting ATPase | 189 | 246 | - | - | |
| Bisa02g0119 | 1071 | Pfam | haloacid dehalogenase-like hydrolase | 478 | 803 | - | - | |
| Bisa02g0119 | 1071 | SFLD | p-type atpase | 463 | 841 | IPR044492 | - | |
| Bisa02g0119 | 1071 | FunFam | Calcium-transporting ATPase | 42 | 98 | - | - | |
| Bisa02g0119 | 1071 | MobiDBLite | consensus disorder prediction | 1 | 37 | - | - | |
| Bisa02g0119 | 1071 | FunFam | Calcium-transporting ATPase | 491 | 689 | - | - | |
| Bisa02g0119 | 1071 | NCBIfam | HAD-IC family P-type ATPase | 757 | 869 | IPR001757 | GO:0005215|GO:0005524|GO:0016020|GO:0016887 | |
| Bisa02g0119 | 1071 | NCBIfam | HAD-IC family P-type ATPase | 422 | 504 | IPR001757 | GO:0005215|GO:0005524|GO:0016020|GO:0016887 | |
| Bisa02g0119 | 1071 | Gene3D | - | 478 | 834 | IPR023214 | - | |
| Bisa02g0119 | 1071 | SFLD | Haloacid Dehalogenase | 463 | 841 | - | - | |
| Bisa02g0119 | 1071 | FunFam | Calcium-transporting ATPase | 236 | 357 | - | - | |
| Bisa02g0119 | 1071 | CDD | P-type_ATPase_Ca_PMCA-like | 165 | 922 | - | - | |
| Bisa02g0119 | 1071 | FunFam | Calcium-transporting ATPase 9 plasma membrane-type | 335 | 505 | - | - | |
| Bisa02g0119 | 1071 | Gene3D | - | 491 | 689 | IPR023299 | GO:0000166 | |
| Bisa02g0119 | 1071 | PRINTS | Sodium/potassium-transporting ATPase signature | 474 | 495 | - | - | |
| Bisa02g0119 | 1071 | PRINTS | Sodium/potassium-transporting ATPase signature | 224 | 244 | - | - | |
| Bisa02g0119 | 1071 | PRINTS | Sodium/potassium-transporting ATPase signature | 600 | 618 | - | - | |
| Bisa02g0119 | 1071 | MobiDBLite | consensus disorder prediction | 23 | 37 | - | - | |
| Bisa02g0119 | 1071 | SUPERFAMILY | Calcium ATPase, transduction domain A | 259 | 354 | IPR008250 | - | |
| Bisa02g0119 | 1071 | SUPERFAMILY | Calcium ATPase, transmembrane domain M | 138 | 1052 | IPR023298 | - | |
| Bisa02g0119 | 1071 | Pfam | E1-E2 ATPase | 259 | 459 | - | - | |
| Bisa02g0119 | 1071 | SMART | Cation_ATPase_N_a_2 | 137 | 211 | IPR004014 | - | |
| Bisa02g0119 | 1071 | FunFam | Calcium-transporting ATPase | 806 | 1055 | - | - | |
| Bisa02g0119 | 1071 | Pfam | Cation transporter/ATPase, N-terminus | 139 | 206 | IPR004014 | - | |
| Bisa02g0119 | 1071 | SUPERFAMILY | HAD-like | 479 | 894 | IPR036412 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Bisa02g0119 | Bisa-ChrBisa02 | 1219338 | 1234070 | Dispersed/Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Bisa02g0119 | 4 | 1069 | Primary Pumps ATPases | AT4G29900 | 74.112 | 0.0 | 1598 |