Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa02g0106 ATGGAAGATGACGAGACATGCAACACCAGGCTGAGTCTTGGACTGGGAATGGGAGGTTATGTGCCAATACTAAAGGAGAATCAGGAAGTAGAGGAAGCCATTAACAATCGTCAAATGGAAGCAGAAGAACTGATCAGTTTGAAGATCAGAATCGATGAAGGGGATGAACAGAGTGATCACAATAACAACAGTTGTAGAAAGAAACTGAGGCTCACAAAGGAGCAGTCAGCCATGCTAGAGGATAGCTTTAAGCTTCATACCTCTCCTAACCCAGTCCAGAAACAAGAACTTGCTCAGCAATTGAATTTGCAGCCCAGACAGGTGGAAGTGTGGTTTCAGAACAGAAGAGCAAGGAAGAAGGTGAAGCAAAGGGAGGTAGAATGGGAGACGTGGAAGAAATGTTGGGAAAATGTGAGGGAGGAGAACAGAAGGTTGAAGAAGGAGGTGGAGGAGCTCAAGTTTGAGATGGCAGTGTGCAGTAATGATAAGGTGGCTATATGTTCGTGGTGTAAGAAGTCTTTGAAGTTGAGCCCCATTAACATCCATGCTCATGCTAAACCATAG 564 0.4486 MEDDETCNTRLSLGLGMGGYVPILKENQEVEEAINNRQMEAEELISLKIRIDEGDEQSDHNNNSCRKKLRLTKEQSAMLEDSFKLHTSPNPVQKQELAQQLNLQPRQVEVWFQNRRARKKVKQREVEWETWKKCWENVREENRRLKKEVEELKFEMAVCSNDKVAICSWCKKSLKLSPINIHAHAKP 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa02g0106 187 CDD homeodomain 66 123 IPR001356 GO:0003677
Bisa02g0106 187 ProSiteProfiles 'Homeobox' domain profile. 62 122 IPR001356 GO:0003677
Bisa02g0106 187 Coils Coil 23 47 - -
Bisa02g0106 187 ProSitePatterns 'Homeobox' domain signature. 97 120 IPR017970 GO:0000981|GO:0006355
Bisa02g0106 187 SMART halz 122 166 IPR003106 GO:0006355|GO:0043565
Bisa02g0106 187 SMART HOX_1 64 126 IPR001356 GO:0003677
Bisa02g0106 187 SUPERFAMILY Homeodomain-like 56 124 IPR009057 -
Bisa02g0106 187 Pfam Homeodomain 66 120 IPR001356 GO:0003677
Bisa02g0106 187 Gene3D - 57 127 - -
Bisa02g0106 187 Coils Coil 135 162 - -
Bisa02g0106 187 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN HAT14 46 172 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa02g0106 Bisa-ChrBisa02 1039380 1040300 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa02g0106 55 153 Homeobox Transcription Factor Family AT4G37790 65.657 4.20e-39 133
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-other Bisa02g0106 Homeodomain 1.5e-17 CL0123