Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa02g0102 ATGCCTCGCCGGCTACTCCAAGTGGGATCTCCTTCATCCTCTGTCGATATTCAGGCATCATCTCCATCCACACACAAATCCGAAGCATTGTTCTTTTTCCTTGGAGTGATAGTAGTGCTCATCATATTGCTGATTCTAGTATATGTATTTCGGAAGCATATTAAACCGGCAAAACTGATGAAAATTATAGCTCCAACTGCACAGCAGCCAGGATCCATGGAGCTTTTGAGTGGAAACCTTCGGACAATTAGCTACTTTGACTACCAGACATTGAAGAAGGCAACCATGAACTTTGATTCTGGTAATCTTCTCGGAAGTGGTGGATTTGGGCCTGTCTATCGGGGAAAGTTGGCAGATGGAAGGCTAATTGCTGTTAAGAAACTGTCTCTTAACAAATCCCAGCAAGGAGAAAAAGAATTTCTAGCAGAGGTGAGGATGATCACGAGTATTCAACACAAAAATCTGGTTCGCTTGATTGGATGTTGCACAGATGGGCCACAAAGGATACTTGTGTATGAATACATGAAGAACAGAAGTCTGGACCTCTTCATATATGGAAACAGGGATCAATTTCTGAATTGGAGCACTAGGTTCCAAATTATTCTTGGGATAGCACGGGGGTTGCAATATTTACATGAGGATTCACACCCTAGAATTGTTCATCGAGATATCAAAGCAAGCAACATTCTTCTTGATGAAAAGTTTCAGCCAAGGATTGGAGACTTTGGGCTAGCTAGATTCTTCCCTGAAGACCAAGATTACCTCAGCACTCAGTTTGCTGGAACATTAGGTTATACAGCTCCTGAATATGCTATTAGAGGGGAATTATCAGAAAAGGCAGACATCTATAGTTTTGGAGTCCTGGTGCTTGAAATCATGGGTTGCAGGAAAAATACAGACCTTACTTTACCATCAGAAAGGCAGTATCTTCCTGACTATGCATGGAAGCTTTATGAAAATTCAAGGTGGATGGATCTGGTAGACCCAAAATTGCAGGAACATGGATTTGTGGAAAAGGATGTTATGCAAGCAATCCATGTGGCCATGTTATGTCTTCAGCCTCATGCAAATTTAAGACCTCCCATGTCAGAGATTGTAGCATTGTTGACCTTCAAAATTGACATGGTTACAACTCCGATGAGACCGGCCTTCCTTGATCGAAGGCGGAAAAAGGATGATGAAATCCACTCTTGGGAAACCAGATCGGAGGTATTCCCTTCGCCTTTGGCCAGTGATTCTGCATCCATAGCTAAATCACCAAACTGA 1266 0.425 MPRRLLQVGSPSSSVDIQASSPSTHKSEALFFFLGVIVVLIILLILVYVFRKHIKPAKLMKIIAPTAQQPGSMELLSGNLRTISYFDYQTLKKATMNFDSGNLLGSGGFGPVYRGKLADGRLIAVKKLSLNKSQQGEKEFLAEVRMITSIQHKNLVRLIGCCTDGPQRILVYEYMKNRSLDLFIYGNRDQFLNWSTRFQIILGIARGLQYLHEDSHPRIVHRDIKASNILLDEKFQPRIGDFGLARFFPEDQDYLSTQFAGTLGYTAPEYAIRGELSEKADIYSFGVLVLEIMGCRKNTDLTLPSERQYLPDYAWKLYENSRWMDLVDPKLQEHGFVEKDVMQAIHVAMLCLQPHANLRPPMSEIVALLTFKIDMVTTPMRPAFLDRRRKKDDEIHSWETRSEVFPSPLASDSASIAKSPN 421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa02g0102 421 Gene3D Phosphorylase Kinase; domain 1 71 174 - -
Bisa02g0102 421 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 20 416 - -
Bisa02g0102 421 ProSitePatterns Serine/Threonine protein kinases active-site signature. 219 231 IPR008271 GO:0004672|GO:0006468
Bisa02g0102 421 FunFam Putative LRR receptor-like serine/threonine-protein kinase isoform A 175 379 - -
Bisa02g0102 421 FunFam Cysteine-rich receptor-like protein kinase 10 63 174 - -
Bisa02g0102 421 SMART serkin_6 98 371 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa02g0102 421 ProSiteProfiles Protein kinase domain profile. 98 371 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa02g0102 421 CDD STKc_IRAK 104 370 - -
Bisa02g0102 421 Pfam Protein tyrosine and serine/threonine kinase 101 368 IPR001245 GO:0004672|GO:0006468
Bisa02g0102 421 Gene3D Transferase(Phosphotransferase) domain 1 175 378 - -
Bisa02g0102 421 SUPERFAMILY Protein kinase-like (PK-like) 76 372 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa02g0102 Bisa-ChrBisa02 1021930 1025569 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa02g0102 22 385 Receptor kinase-like Gene Family AT1G56120 44.414 4.15e-103 323
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Bisa02g0102 PK_Tyr_Ser-Thr 1.2e-47 CL0016