Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa02g0095 ATGTATGTCATGATACCAACTTTTCCTTATTATCTATCCTCTTCTTCTTCCTCTCCTTCTCCTATGCCTATAGATCTTAATATCGAACATCACAACCATGACCTAGTCTTTAGCCCAATCTATCAACCCTCTTCTTCTAATTCTTCTCTATCGAATCCTACTCTCTTCAACCCTTCTCAGAATCATGCAGGATCTTCCTACTGGGAGCCCAAGAACTTACAAACTGATCATGAAGAGGCTGGGAAGGTCATTGTTTCTAGTGGATCATGGGATGATCCAGCAGAAGAAAAGTGTGAGAGAAAGAAGGCTGTGAAACTGAAAGTCTGGAAAAAAAGATCAGAGAGGGAGAATCAAAATCATCAAGGTGAGGATACTGATTCGAAGTGGATGTCTTCAAAGATGAGGATGATGAGGAAGATAGTGGTTTCAGATCAAAAGGGTTCTGATATACCACCTGCAGGCACCTGTGAGCAGAAGTTTGAAGATGAAAATAAAAAACAACAACCATTATTATCTCCTCAAGGAACTGATAATAATAGCAGCAGCAACAGTTCTTCAACCCACAGTAGTAGTGATAATTATCATGATAATAATACTAATAATAATAGTAATATCACTGTTAGGGTTTGTGCTGATTGCCACACCACCAAGACCCCTTTGTGGAGAAGTGGACCAAGAGGCCCCAAGTCGCTTTGCAATGCGTGTGGAATTCGTCAAAGGAAGGCAAGGCGAGCCATGGCTGCCGCTGTAGCCAATGGCTTGGCTCTAGCGGCTGAGACATCTCCGGCGAAGGGAAATTACAAGTTTCAGAGCAAAGAGAAGAAGTCAAAAACGGAGTGTGAGAGTCATGAGTCGTTGAAGAAGAAGCGCAAGCTTGATGATCAAGCCAAGCCAGCATCTAGAGGTAGAGTAAAGAAGTTTAATGGGTTTGAGGATTTCAGAGTGAGCTTGAGTAAAAAGTTGGCTCCATCACAAGTTTTCCCTCAGGATGAGAAGGAGGCTGCCATTCTTCTCATGGCTTTATCTTATAATGGCTTGGTTCATGGATGA 1050 0.4238 MYVMIPTFPYYLSSSSSSPSPMPIDLNIEHHNHDLVFSPIYQPSSSNSSLSNPTLFNPSQNHAGSSYWEPKNLQTDHEEAGKVIVSSGSWDDPAEEKCERKKAVKLKVWKKRSERENQNHQGEDTDSKWMSSKMRMMRKIVVSDQKGSDIPPAGTCEQKFEDENKKQQPLLSPQGTDNNSSSNSSSTHSSSDNYHDNNTNNNSNITVRVCADCHTTKTPLWRSGPRGPKSLCNACGIRQRKARRAMAAAVANGLALAAETSPAKGNYKFQSKEKKSKTECESHESLKKKRKLDDQAKPASRGRVKKFNGFEDFRVSLSKKLAPSQVFPQDEKEAAILLMALSYNGLVHG 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa02g0095 349 MobiDBLite consensus disorder prediction 110 203 - -
Bisa02g0095 349 Gene3D - 208 246 IPR013088 GO:0006355|GO:0008270
Bisa02g0095 349 SMART GATA_3 204 255 IPR000679 GO:0006355|GO:0043565
Bisa02g0095 349 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 206 245 - -
Bisa02g0095 349 ProSiteProfiles GATA-type zinc finger domain profile. 208 240 IPR000679 GO:0006355|GO:0043565
Bisa02g0095 349 MobiDBLite consensus disorder prediction 268 301 - -
Bisa02g0095 349 MobiDBLite consensus disorder prediction 265 301 - -
Bisa02g0095 349 Pfam GATA zinc finger 210 243 IPR000679 GO:0006355|GO:0043565
Bisa02g0095 349 MobiDBLite consensus disorder prediction 110 133 - -
Bisa02g0095 349 CDD ZnF_GATA 209 237 IPR000679 GO:0006355|GO:0043565
Bisa02g0095 349 MobiDBLite consensus disorder prediction 167 203 - -
Bisa02g0095 349 MobiDBLite consensus disorder prediction 48 67 - -
Bisa02g0095 349 ProSitePatterns GATA-type zinc finger domain. 210 235 IPR000679 GO:0006355|GO:0043565
Bisa02g0095 349 PANTHER GATA TRANSCRIPTION FACTOR 22-RELATED 9 348 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa02g0095 Bisa-ChrBisa02 958747 960622 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa02g0095 128 349 C2C2-Gata Transcription Factor Family AT4G26150 37.657 1.12e-32 123
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-GATA Bisa02g0095 GATA 4.6e-17 CL0167