Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa02g0082 ATGGCTCCCAGAATCCTACTATGCGGCGACGTTTTGGGCCGCCTCAACCAGCTCTTCAAGCGCGTCTCATCTGTCAACAAATCGGCTGGTCCATTCGATGCGCTTTTCTGCGTGGGTCAGTTCTTCCCTGACTCTCCGGACCAGCTCGATGAGTTCATGGGCTACATTGAGGGTCCGACACAGGTTCCTCTTCCGACTTACTTCATCGGCGACTACGGAGTTGGTGCCCCTAAAGTTCTGTTGGCAGCTTCTAAAGACTCCGCGAACCGTGGCTTCAAGCTGGACGGTTTGAAGGTTTGCGAGAATTTGTACTGGTTGAAAGGCAGTGGCAAGTTCGCCATCTTAGGATTATCTGTTGCGTATTTATCTGGTAGACAATCGTCCGATGTTCAACAGTTTGGAACTTACAGTCAAGATGATATTGATGCTTTGCGAGCAATAGCTGAGGAACCTGGAATAGTTGATTTGTTCTTGACATATCCTTTAATTCATGTGCACAAAGTTTTCCTTATCAGTCTTGGGGTCACAAATAGAGCAAATACATCAGATGTCCCTGCTGGACTCTTAGATTCCATAGGGAGTGATTCAACCATATCAGAGTTAGTAGGAGAGATTAAACCACGTTATCATATTGCAGGCACTAAAGGTATATACTATGCTCGTGAACCTTATTCTAATGTAGAGGCTTTGCATGTGACTCGCTTCATAGGGCTTGCTTCGGTTGGAAATAGAGATAAGCAGAAATTTATACATGCAATTTCTCCCACACCTGCATCCTCCATGTCTTCAGCCGAGATTGCCATGAAAACCACAAATACCACCTTATCACCATATACATTTGTGGAGAAAGGAACTTCTCCAAAGGAAGCTGCAAAGAGGTCCAGTGAAAGTTTTTCTGATTCTCAGTATTGGAGATATGATGTTTCTCAAAAGCGACAGAAACATGGAGCTGGAGATGGTGATAAGTTGTGCTTTAAATTTGTATCATCTGGCTCTTGTCTGAGGGGAGAAAAGTGCAATTTTCGACATGATTTAGATGCAAGGGAACTATCTATGAGAGGTGTTTGTTTTGATTTTTTGAACAAAGGGAAATGTGAAAGGGGTCCAGATTGCAAATTTGAGCACTGTTTGCAGGATGAAGGGGAGAATTATGCTCACAGGAGGCCTAGATCTGAAAGTACTAGCTCCAGCAGATCAAAAGAGTGTTGGTTTTGCTTGTCAAGCCCCAGTGTGGAGTCACATTTGATCATAAGCATTGGAGAAAATTACTACTGTGCACTGGCTAAAGGCCCACTTGTAGATGACCATGTGCTGATAATACCGGTTGAGCATTTGCCAAGTACCTTATTGCTTTCAGCAGAATCTGAAGTTGAGCTTAGTAAATTCCAGAGCAGTCTCAAGATGTACTTCAAAAATCAAGGAAAGCAAGTCATCTTTTTTGAGTGGGCTTCCAGACGTACTACTCATGCCAATCTTCAGGTTGTTCCTATCTCATCTTCCAAAACAATTATGGTTGAAAAAGTGTTCAACTTAGCAGCAGAAAAGCTGGGATTTAAATTTGTGGCTAAGAAATTTGATTGCAATTCTGATGGAAGAAAATTTTTGAGGACACAAATTCATGGAAATTCAAGTTTGTTCTATGTTGAACTCCCAGGAGGCACAATACTATTGCACCGGGTTGAAGATAGTGAAAAATTTCCTGCCCAGTTTGGTCGTGAGGTTGTGTCAGGGTTGCTGAATATAGCAGATAAGGCAGATTGGAGGAACTGCAAATATAGCAAAGAGGAGGAAACAAAAATGACTGAAGATTTTAAGAGTCGATTCCAAGAATATGATCCAAATTGTTGA 1848 0.4237 MAPRILLCGDVLGRLNQLFKRVSSVNKSAGPFDALFCVGQFFPDSPDQLDEFMGYIEGPTQVPLPTYFIGDYGVGAPKVLLAASKDSANRGFKLDGLKVCENLYWLKGSGKFAILGLSVAYLSGRQSSDVQQFGTYSQDDIDALRAIAEEPGIVDLFLTYPLIHVHKVFLISLGVTNRANTSDVPAGLLDSIGSDSTISELVGEIKPRYHIAGTKGIYYAREPYSNVEALHVTRFIGLASVGNRDKQKFIHAISPTPASSMSSAEIAMKTTNTTLSPYTFVEKGTSPKEAAKRSSESFSDSQYWRYDVSQKRQKHGAGDGDKLCFKFVSSGSCLRGEKCNFRHDLDARELSMRGVCFDFLNKGKCERGPDCKFEHCLQDEGENYAHRRPRSESTSSSRSKECWFCLSSPSVESHLIISIGENYYCALAKGPLVDDHVLIIPVEHLPSTLLLSAESEVELSKFQSSLKMYFKNQGKQVIFFEWASRRTTHANLQVVPISSSKTIMVEKVFNLAAEKLGFKFVAKKFDCNSDGRKFLRTQIHGNSSLFYVELPGGTILLHRVEDSEKFPAQFGREVVSGLLNIADKADWRNCKYSKEEETKMTEDFKSRFQEYDPNC 615
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa02g0082 615 CDD MPP_CWF19_N 6 241 - -
Bisa02g0082 615 PANTHER CWF19, CELL CYCLE CONTROL PROTEIN 4 614 IPR040194 -
Bisa02g0082 615 ProSiteProfiles Zinc finger C3H1-type profile. 318 346 IPR000571 GO:0046872
Bisa02g0082 615 Pfam Protein similar to CwfJ C-terminus 1 394 509 IPR006768 -
Bisa02g0082 615 Pfam Protein similar to CwfJ C-terminus 2 533 612 IPR006767 -
Bisa02g0082 615 Gene3D - 307 376 - -
Bisa02g0082 615 SMART c3hfinal6 320 345 IPR000571 GO:0046872
Bisa02g0082 615 SMART c3hfinal6 352 377 IPR000571 GO:0046872
Bisa02g0082 615 SUPERFAMILY CCCH zinc finger 322 347 IPR036855 GO:0046872
Bisa02g0082 615 ProSiteProfiles Zinc finger C3H1-type profile. 355 378 IPR000571 GO:0046872
Bisa02g0082 615 FunFam Zinc finger CCCH domain-containing protein 59 379 504 - -
Bisa02g0082 615 Gene3D - 377 520 IPR036265 -
Bisa02g0082 615 SUPERFAMILY HIT-like 397 496 IPR036265 -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Bisa02g0082 CwfJ_C_1 2.9e-38 CL0265