Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa02g0075 ATGGTGGTGGCTCACTGTAGCTCCGGTGAAATCGGCCGCGGCAGTGGCAGGAGGTCAGAATCCATTGCTAGAATATTATTGAACGAAGCCATGGGAAGAGTAGCGAGAGTCAAATCAGAGCAAGTAACAGCGTCTGATGACGACGACAACGTTCCTTCGAATTCTGGTGGCTCCTGTGATTTTGTAGGTGAACCACACAACGGCGTTTTCAGCGAGGATTCGGGAAAGAAGACATCGGAAGTGACGACGGAGGATGGGTTTATCGAAGCGGTTCCGCCGGTTCATATCAAGCTAGAGGAACCGGCCGGAGCGGTGGATGCTGTCGACAGCGGCGGTCGTTGCTACGCCGGGGTTAATGGGTCGTCGATCGAGTCGCCGAAACCGATGGAAGGGTTGCACGAGGTGGGTCCACCGCCCTTCCTCAGGAAGACCTTCGAAATGGTGGAGGACCCGGAAACCGACCCGATTGTGTCCTGGAGCTTAGCTCGCGATAGCTTCATCGTTTGGGATTCTCACGAATTTTCCAAAATTCTTCTCCCTAAGTACTTCAAACACAGCAATTTCTCGAGCTTCATTCGCCAGCTTAACACATACGGTTTCCGGAAGATTGATTCAGACCGTTGGGAGTTTGCAAATGAAGGATTTCTGGGAGGGAAGAAGCATTTGCTAAAGAACATCAGGAGAAGAAGCAAGTATAACAAACTGCAACAAGGAGGAGCATTCACCTCCATGAAGCCTGGCCTGGAGGGTGAAGTTGAGAAACTGAAGAGGGACCAGAACATACTGCAAGTGGAAATTCTCAAGCTGAGGCAGCAGCAGGAGAATTCACAGGTTCAGCTCGTCAATGTTCAAGAACGAGTTCGGTCTGCAGAGTTGAAGCAGTACCAGATGCTATTTTTCCTGACCAAGATGGCCCGAAAGCCAACGTTGGTTCAGCAACTAATTCAGAGGATAAAGCGAAAAAGAGAGCTTGATGGGGGAGAGATTGGCAAGAGACCCAGATTGCGTGGAACCCATTACGCTGTAAACTTCCCTAAGGCCATGGACACCATCCAAGGTGTTGATTACAGACAACAAGTTCATAGAGAACTAGCTTTTCTGCAATCAGAGCTCACTGGAGTCTTGTCTGAAACAGTGAACACAAGCAGAATGGAGCCTCCAGTCCCTTCTCCCATGGAAGATGAACGCAGCCACATACAAGGCTTAAGGGGCAATACATCCAGAGCAAGTGCTAATGATGTATCCTCCGCTTGCTCAAACCATCTGATTGGGTCGGATCTGCAAGTGGACTGGTGGGGCAAACTGGTTGTATCTGATCAATTCCTTGAGAAGGTTGGCCAGAGTGTGTTCTTGCAGATGCTGCTGCTGCTGCTGCTTCAACAGCGATGA 1389 0.5004 MVVAHCSSGEIGRGSGRRSESIARILLNEAMGRVARVKSEQVTASDDDDNVPSNSGGSCDFVGEPHNGVFSEDSGKKTSEVTTEDGFIEAVPPVHIKLEEPAGAVDAVDSGGRCYAGVNGSSIESPKPMEGLHEVGPPPFLRKTFEMVEDPETDPIVSWSLARDSFIVWDSHEFSKILLPKYFKHSNFSSFIRQLNTYGFRKIDSDRWEFANEGFLGGKKHLLKNIRRRSKYNKLQQGGAFTSMKPGLEGEVEKLKRDQNILQVEILKLRQQQENSQVQLVNVQERVRSAELKQYQMLFFLTKMARKPTLVQQLIQRIKRKRELDGGEIGKRPRLRGTHYAVNFPKAMDTIQGVDYRQQVHRELAFLQSELTGVLSETVNTSRMEPPVPSPMEDERSHIQGLRGNTSRASANDVSSACSNHLIGSDLQVDWWGKLVVSDQFLEKVGQSVFLQMLLLLLLQQR 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa02g0075 462 PRINTS Heat shock factor (HSF) domain signature 191 203 IPR000232 GO:0003700|GO:0006355|GO:0043565
Bisa02g0075 462 PRINTS Heat shock factor (HSF) domain signature 178 190 IPR000232 GO:0003700|GO:0006355|GO:0043565
Bisa02g0075 462 PRINTS Heat shock factor (HSF) domain signature 140 163 IPR000232 GO:0003700|GO:0006355|GO:0043565
Bisa02g0075 462 SMART hsfneu3 136 229 IPR000232 GO:0003700|GO:0006355|GO:0043565
Bisa02g0075 462 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 126 349 IPR027725 -
Bisa02g0075 462 FunFam Heat shock transcription factor 1 133 230 - -
Bisa02g0075 462 SUPERFAMILY "Winged helix" DNA-binding domain 136 229 IPR036390 -
Bisa02g0075 462 ProSitePatterns HSF-type DNA-binding domain signature. 179 203 IPR000232 GO:0003700|GO:0006355|GO:0043565
Bisa02g0075 462 MobiDBLite consensus disorder prediction 38 80 - -
Bisa02g0075 462 Coils Coil 252 286 - -
Bisa02g0075 462 Pfam HSF-type DNA-binding 140 229 IPR000232 GO:0003700|GO:0006355|GO:0043565
Bisa02g0075 462 Gene3D - 133 230 IPR036388 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa02g0075 Bisa-ChrBisa02 520540 522495 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa02g0075 126 338 HSF AT2G26150 57.534 6.79e-85 263
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Bisa02g0075 HSF_DNA-bind 4.2e-31 CL0123