Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa02g0073 ATGTTCTCCGATTCGAACGAGTTCAGCAAGGACAGCGCCATCTGCTGTTTAGCCAACAACATTTCAGAGCCTCCAGCTCCCGACACGGCAGCGTTAAGGCGCCTCTCGGACAATTTGAAATCAATCTTCGACACCCCGGACTCGGACGACTTCTTCGCCGACGCCAGAATCGTTCTTGGCGACGGTCGAGAGGTTCCGGTGCACCGGTGCATTCTGTCGGCGAGGAGCCCTTTCTTCAAGAGCTTCTTCTCCGGCGGCAGTGCGAAGTTGGAATTGAGGGAGGTGGCTAGGGATTACGTGGTTGGGTTCGATGCGTTAGTGGGCGTTGTGGGATATTTGTACAGCGGGAGGGTACGGTCGTTGCCCAAGCAAGTTTGTGAGTGTGTGGACGATAGTTGCTCCCATTTATGGTGTAGACCCGCTCTGGATTTCATGGTCCAGCTGCTTTATGCTTCCGCTACTTTTGAAATATCTGACTTGGTTACTCTTTATCAGAGGCATCTGCTACACATTCTTGACAAGGCAGCAGCAGATGACATTTTATTCGTTGTTTCTGTAGCAAACATATGTGGTAAATCCTGTGAGAGACTGCTGGCAAGGGGTACTGAGATGATCATCAAATCCGATGTTGATGTCATCACACTTGCAAAAGCGCTTCCACAACATATTGTGAAACAAATCATGGATAAACGTATAGAACTTGGCTTGGACAAGCCCAACAACATGAGTTTACCAGATAAACACGTGAAGAGAATACACAGGGCTCTTGATTCAGATGATGTAGAGCTAGTCCGGTTGCTGTTGAGAGAGGGACATACTAATCTAGATGACGCCCATGCCCTTCACTATGCTGTTGCATACTGCGATACGAAGACAACCACGGAGCTTCTTGATCTTGGACTTGCTGATGTTAATTGTAAAAATCCTAGGGGATATAGTGTACTGCATGTGGCCGCAATGAGGAAAGAGCCCAAGATTATAGTGTCCCTCTTGACAAAGGGAGCCCAGCCTTCTGATCTCACTTTGGATGGTAGGAAAGCCCTTCAGATTTCGAAGCGCCTTACTAATGCTGTCGATTATTATAAGTCTGCAGATGGAGGAAAAGCATCTTCCAGGGATAGATTGTGCATTGAGATATTGGAGCAAGCTGAGAGAAGAGAGCCTTTACTTGGGGAGGCATCTCTTTCTCTTGCCGTGGCAGGGGATGATCTGCGTATGAAATTGTTATACCTTGAAAACAGAGTTGGATTGGCAAAGCTATTGTTCCCCATGGAAGCAAAAGTTGTGATGGACATTGCACAAGTTGATGGAACCAGTGAATTTCCATTACTAGACATCACTCAAAGTGTGGGTAATAATACTCAGAGGACAACAGTGGACTTAAATGAGGCCCCTTTTAGAATTAAAGAGGAGCATCTAATCAGGATGAGAGCACTCTCTAGAACTGTGGAATTAGGGAAACGATTCTTCCCTCGTTGCTCAGAAGTACTGAACAAGATCATGGATGCTGATGACCTATCTCAGCTGGCATGTATGGGTGATGACACTCCTGAAGAAAGACAAGTGAAGAGAAGAAGGTACATGGAGCTGCAAGAAGTTCTGAGTAAGGCCTTCAATGAGGACAGGGAGGAGTTTGATAGGTCTGCTGTTTCATCCTCGTCTTCTTCAACCTCGATAGGAGCGGTTAGGAGGCGTCCCATGTAG 1704 0.4695 MFSDSNEFSKDSAICCLANNISEPPAPDTAALRRLSDNLKSIFDTPDSDDFFADARIVLGDGREVPVHRCILSARSPFFKSFFSGGSAKLELREVARDYVVGFDALVGVVGYLYSGRVRSLPKQVCECVDDSCSHLWCRPALDFMVQLLYASATFEISDLVTLYQRHLLHILDKAAADDILFVVSVANICGKSCERLLARGTEMIIKSDVDVITLAKALPQHIVKQIMDKRIELGLDKPNNMSLPDKHVKRIHRALDSDDVELVRLLLREGHTNLDDAHALHYAVAYCDTKTTTELLDLGLADVNCKNPRGYSVLHVAAMRKEPKIIVSLLTKGAQPSDLTLDGRKALQISKRLTNAVDYYKSADGGKASSRDRLCIEILEQAERREPLLGEASLSLAVAGDDLRMKLLYLENRVGLAKLLFPMEAKVVMDIAQVDGTSEFPLLDITQSVGNNTQRTTVDLNEAPFRIKEEHLIRMRALSRTVELGKRFFPRCSEVLNKIMDADDLSQLACMGDDTPEERQVKRRRYMELQEVLSKAFNEDREEFDRSAVSSSSSSTSIGAVRRRPM 567
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa02g0073 567 MobiDBLite consensus disorder prediction 542 567 - -
Bisa02g0073 567 ProSiteProfiles Ankyrin repeat profile. 310 342 IPR002110 GO:0005515
Bisa02g0073 567 Gene3D Potassium Channel Kv1.1; Chain A 29 205 IPR011333 -
Bisa02g0073 567 ProSiteProfiles BTB domain profile. 53 122 IPR000210 GO:0005515
Bisa02g0073 567 Gene3D - 209 446 IPR036770 -
Bisa02g0073 567 Pfam BTB/POZ domain 50 168 IPR000210 GO:0005515
Bisa02g0073 567 Pfam NPR1/NIM1 like defence protein C terminal 352 557 IPR021094 -
Bisa02g0073 567 SUPERFAMILY Ankyrin repeat 243 353 IPR036770 -
Bisa02g0073 567 CDD BTB_POZ_NPR_plant 33 172 - -
Bisa02g0073 567 Pfam Domain of unknown function (DUF3420) 209 253 IPR024228 -
Bisa02g0073 567 SUPERFAMILY POZ domain 35 170 IPR011333 -
Bisa02g0073 567 FunFam BTB/POZ domain and ankyrin repeat-containing protein NPR1 221 374 - -
Bisa02g0073 567 PANTHER REGULATORY PROTEIN NPR3 2 559 IPR044292 GO:0009862|GO:2000022|GO:2000031
Bisa02g0073 567 SMART ANK_2a 310 339 IPR002110 GO:0005515
Bisa02g0073 567 SMART ANK_2a 276 306 IPR002110 GO:0005515
Bisa02g0073 567 SMART ANK_2a 247 275 IPR002110 GO:0005515
Bisa02g0073 567 SMART BTB_4 53 172 IPR000210 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa02g0073 Bisa-ChrBisa02 475237 482880 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Bisa02g0073 NPR1_like_C 2.8e-92 No_clan