Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa02g0066 ATGAATGGTAGTGTAGATGGCGATGAGTGAAACCCAGAACCATGGTCCATGGTGGTGAGACCCGTATTCTTTTCACTTCTGGCATTATTGGGCCTGACCAGGCCCAACTCAAATCAACCGATCCGAGGAGTTTGGGAAACCCTAAACAATAGCACTCTTCGATCAAACATCAAACTATCGCAGTCTAGCTTTTCTCCGATCAACGAGCTATTTTCATCGTCAAAAGTCATGGCAGGAGAAGCACCCGAGGGTTCACAGTTCGATGGTCGTCAATATGATGCCAAGATGAATGATTTACTTACAGCTGATGGACAGGATTTCTTTGCATCTTATGATGAGGTTTATGATAGTTTTGATGCTATGGGTTTGCAAGAGAACCTCCTGAGAGGCATTTATGCATACGGTTTTGAGAAGCCATCAGCTATTCAGCAAAGGGGAATTGTTCCCTTCTGCAAGGGGCTTGATGTTATTCAACAGGCTCAGTCTGGAACTGGGAAGACAGCAACTTTTTGCTCTGGAATTTTGCAGCAACTTGATTATGGTTTGATGGAATGCCAGGCTTTGGTTCTAGCACCTACTCGAGAGCTAGCGCAGCAAATTGAGAAGGTTATGCGAGCACTTGGAGATTATCTTGGTGTGAAGGTGCATGCATGTGTGGGAGGAACCAGTGTCCGTGAAGACCAACGGATTCTGTCAAGTGGTGTTCATGTTGTTGTTGGTACTCCTGGTCGTGTATTTGATATGCTGCGCAGGCAGTCACTTCGGCCAGATTACATTAAGATGTTTGTATTGGATGAGGCAGATGAGATGCTTTCCCGAGGTTTCAAAGATCAGATCTATGATATATTCCAGCTGCTGCCAAGTAAGATCCAGGTGGGAGTTTTCTCTGCTACAATGCCTCCTGAGGCGCTTGAGATCACAAGGAAGTTTATGAACAAACCTGTTAGGATCCTTGTGAAGCGGGACGAACTCACCTTGGAGGGTATAAAGCAGTTTCATGTCAATGTTGAGAGAGAGGAATGGAAGCTGGACACACTCTGTGATCTTTATGAGACCTTAGCTATCACTCAAAGTGTTATTTTTGTGAATACCCGAAGGAAGGTTGATTGGCTTACGGACAAAATGCGTAGCCGGGACCACACTGTCTCAGCAACCCATGGAGACATGGACCAGAATACTAGAGACATTATTATGCGTGAATTCCGTTCTGGTTCTTCTCGTGTTCTAATAACAACAGATCTTTTGGCACGTGGTATTGATGTCCAGCAAGTGTCTCTAGTTATAAACTATGATCTCCCAACACAGCCTGAGAACTATCTCCATCGCATTGGTCGTAGTGGTAGGTTTGGGAGGAAAGGTGTTGCCATCAACTTTGTGACAAAGGATGATGAAAGAATGCTGTTTGACATCCAGAAGTTTTATAACGTGGTAATAGAGGAGCTGCCATCAAATGTTGCTGAACTCCTCTAA 1470 0.4469 MNGSVDGDEXNPEPWSMVVRPVFFSLLALLGLTRPNSNQPIRGVWETLNNSTLRSNIKLSQSSFSPINELFSSSKVMAGEAPEGSQFDGRQYDAKMNDLLTADGQDFFASYDEVYDSFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLMECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILSSGVHVVVGTPGRVFDMLRRQSLRPDYIKMFVLDEADEMLSRGFKDQIYDIFQLLPSKIQVGVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFHVNVEREEWKLDTLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTKDDERMLFDIQKFYNVVIEELPSNVAELL 489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa02g0066 489 PANTHER RNA HELICASE 93 473 - -
Bisa02g0066 489 SMART helicmild6 369 450 IPR001650 -
Bisa02g0066 489 Gene3D - 106 324 IPR027417 -
Bisa02g0066 489 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 147 317 IPR014001 -
Bisa02g0066 489 ProSiteProfiles DEAD-box RNA helicase Q motif profile. 116 144 IPR014014 GO:0003724
Bisa02g0066 489 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 328 489 IPR001650 -
Bisa02g0066 489 FunFam Eukaryotic initiation factor 4A-III 324 489 - -
Bisa02g0066 489 CDD SF2_C_DEAD 329 459 - -
Bisa02g0066 489 FunFam Eukaryotic initiation factor 4A-II 104 323 - -
Bisa02g0066 489 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 185 470 IPR027417 -
Bisa02g0066 489 Gene3D - 325 489 IPR027417 -
Bisa02g0066 489 Pfam DEAD/DEAH box helicase 141 302 IPR011545 GO:0003676|GO:0005524
Bisa02g0066 489 CDD DEADc_EIF4A 120 318 - -
Bisa02g0066 489 SMART ultradead3 135 332 IPR014001 -
Bisa02g0066 489 ProSitePatterns DEAD-box subfamily ATP-dependent helicases signature. 263 271 IPR000629 -
Bisa02g0066 489 Pfam Helicase conserved C-terminal domain 342 450 IPR001650 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa02g0066 Bisa-ChrBisa02 305332 311306 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa02g0066 77 489 Eukaryotic Initiation Factors Gene Family AT1G72730 87.923 0.0 759