Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa01g4220 ATGGATAATGAGGTGCTTGAATTTGACATTGGATTGGGAGTAGGAGAAGGAGATGGCCTCGGTGATGATGATGGTGGGGACATTGAGCAACACATTGATGAGGACGATTTGGGTTATAGCCCTCCTCCTAGCAGTGGTGGTGGAGGTGCTGTTGGTAGCGGTGAAATATATGTTCCTGAGGGGGACCTCTTGGATCTTGAACCTTATGAGAGCATGGAATTCGAGTCTGAGGAGGCTGCAAAGGCCTTCTATAACTCCTATGCTCGTCGTGTTGGGTTCAGTACCCGTGTCAGCTCATCTCGTCGTTCCAGGCGTGATGGAGCTATTATACAGAGGCAATTTGTTTGTGCAAAGGAGGGGTTCCGCAATTTGAACGAGAAGCGCACAAAGGATAGGGAGATTAAGCGCCCACGAACCATTACTAGAGTAGGATGCAAAGCATCCTTGTCAGTGAAAATGCACGACTCTGGCAAGTGGATAGTGTCAGGGTTTGTTAGAGAACATAACCATGAACTCGTTCCACCCGATCAGGTGCATTGCCTTCGCTCTCACAGGCAAATATCAGGAGCTGCAAAGACGCTAATTGATACTTTACAGGCTGCTGGAATGGGTCCTCGAAGAATTATGTCAGCACTCATTAAAGAGTATGGTGGGATTAGCAAAGTCGGTTTTACAGAGGTTGATTGTAGAAATTACATGAGGAATAATCGCCAGAGAAGTTTGGAAGGGGACATTCAACTTGTTTTGGATTATTTGAGGCAAATGCATGCTGAAAACCCTAATTTCTTCTATGCTGTGCAAGGTGACGAGGATCAATGCATGAACAATGTTTTTTGGGCTGATCCGAAGGCAAGGATGAACTATACTTTTTTTGGTGATACCGTCACTTTTGACACTACATACCGATCTAATAGATACCGGCTACCCTTTGCCCCCTTCACTGGTGTCAACCATCATGGACAACCTGTTCTCTTTGGTTGTGCTTTCCTAATAAATGAATCAGAAGCATCATTTGTATGGCTGTTTAAGACATGGCTTATGGCAATGTGTGGACGCCCTCCAGTGTCAATAACAACTGATCATGATTCTGTAATACGGTCAGCCATAATACAAGTATTCCCTGAGACCCGTCACCGTTTCTGCAAGTGGCACATCTTTAAAAAATGTCAGGAGAAGTTATCTCACATTTTTCTCAAACATCCTAATTTTGAAGCTGAATTTCACAAATGTGTCAACTTGACTGAGTCAATTGAGGAATTTGAGTCTTGCTGGCTAACACTTGTTGAGAGATATAATCTTAGGGACCATGAATGGCTTCAAGCAATATATTCTTCTCGCAGGCAGTGGGTACCTGTGTATTTGCGAGACACATTCTTTGCAGAAATGTCCATTACACAGCGAAGCGATAGTATGAACTCATACTTTGATGGCTATGTGAATGCTTCAACCAATTTGAATCAATTCTTTAAGTTGTATGAAAAAGCACTAGAAAGTCGCAATGAGAAAGAAGTAAGAGCTGATTATGACACAATGAATTCTTTGCCAACATTGAGGACCCCATCTCCAATGGAAAAACAAGCATCTGAGCTGTACACTAGAAAAATCTTCATGAGGTTCCAAGAAGAGTTAGTTGGGACACTAACATTCATGGCTTCTAAGGCTGAGGATGATGGAGAGGTCATTACATATCACGTAGCAAAATTTGGAGAGGACCATAAAGCTTACTATGTTAAATTCAATGTGTTAGAGATGAAAGCAACTTGCAGTTGCCAAATGTTTGAATTCTCAGGCCTTGTTTGCAGACATGTTTTGGCTGTCTTTAGAGTAACCAATGTGCTTACTCTCCCATCTCATTATATATTGAAACGTTGGACCAGAAATGCCAAGAGCAATGTATTATTAGAAGACCATTCTACTGATGTATATGCTTATTATTTGGAATCTCACACTGTTAGATATAATACCCTCCGACATGAGGCCTTCAAATTTGTTGATGAAGGAGCAAAGTCTCCTGAAATTTATGATGTGGCAATGGATTCTTTGCAAGAAGCTTCAAAAAGAGTTGCTGAAGCAATAAAAAATGAGAGAAGAACTCCCATCAGCAATGGAAAAGCTCGGAGTTACTTGCTGAATGATGGAACTAATGCAAATTACACAAGTGGGGTCCTTGAAGAAAGCTTGGGCAAGCAAATATCTGAGGATGACATGGACAAGAATATTAGAGAACTTAAGAATGAGCTTCAATCTGCAAATCGGAAGTGTGAAATTTACCGGTCCAACTTGCTTTCTGCTCTGAAAGCTGTTGAGGATCACAAGTTAGAGTTGTCAGTTACGGTGCAAAACATCAAGATCAGTATGAAAGATGGTCTCTGA 2373 0.4172 MDNEVLEFDIGLGVGEGDGLGDDDGGDIEQHIDEDDLGYSPPPSSGGGGAVGSGEIYVPEGDLLDLEPYESMEFESEEAAKAFYNSYARRVGFSTRVSSSRRSRRDGAIIQRQFVCAKEGFRNLNEKRTKDREIKRPRTITRVGCKASLSVKMHDSGKWIVSGFVREHNHELVPPDQVHCLRSHRQISGAAKTLIDTLQAAGMGPRRIMSALIKEYGGISKVGFTEVDCRNYMRNNRQRSLEGDIQLVLDYLRQMHAENPNFFYAVQGDEDQCMNNVFWADPKARMNYTFFGDTVTFDTTYRSNRYRLPFAPFTGVNHHGQPVLFGCAFLINESEASFVWLFKTWLMAMCGRPPVSITTDHDSVIRSAIIQVFPETRHRFCKWHIFKKCQEKLSHIFLKHPNFEAEFHKCVNLTESIEEFESCWLTLVERYNLRDHEWLQAIYSSRRQWVPVYLRDTFFAEMSITQRSDSMNSYFDGYVNASTNLNQFFKLYEKALESRNEKEVRADYDTMNSLPTLRTPSPMEKQASELYTRKIFMRFQEELVGTLTFMASKAEDDGEVITYHVAKFGEDHKAYYVKFNVLEMKATCSCQMFEFSGLVCRHVLAVFRVTNVLTLPSHYILKRWTRNAKSNVLLEDHSTDVYAYYLESHTVRYNTLRHEAFKFVDEGAKSPEIYDVAMDSLQEASKRVAEAIKNERRTPISNGKARSYLLNDGTNANYTSGVLEESLGKQISEDDMDKNIRELKNELQSANRKCEIYRSNLLSALKAVEDHKLELSVTVQNIKISMKDGL 790
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa01g4220 790 ProSiteProfiles Zinc finger SWIM-type profile. 575 611 IPR007527 GO:0008270
Bisa01g4220 790 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 64 689 IPR031052 GO:0006355
Bisa01g4220 790 Coils Coil 678 698 - -
Bisa01g4220 790 Pfam SWIM zinc finger 563 609 IPR007527 GO:0008270
Bisa01g4220 790 Pfam FAR1 DNA-binding domain 83 174 IPR004330 -
Bisa01g4220 790 Coils Coil 733 760 - -
Bisa01g4220 790 SMART 26again6 586 613 IPR006564 GO:0008270
Bisa01g4220 790 MobiDBLite consensus disorder prediction 12 54 - -
Bisa01g4220 790 Pfam MULE transposase domain 295 388 IPR018289 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa01g4220 Bisa-ChrBisa01 100818835 100823013 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Bisa01g4220 MULE 5.7e-28 CL0219