Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa01g4207 ATGTCCAACTCCGATTCTCCTTCTGCCACAACCTGCGTCAATCAGATGCAGAAGCACCATTCTCGGAATCCACGAAAGAAACGCAGTAGATTGATCACCATCGTCGACCATCACAAACAAGCGGACATGGTGACGCGCCCATGCAGCGAGTGCGGGAAGAAGTTCTGGTCATGGAAGGCTCTGTTTGGCCACATGCGCTGTCATCCCGAACGCCAATGGCGTGGCATCAACCCCCCGCCCAACCTCCTTCGACAACCTCCTCCTTCACCGGAGATGACCCCGGAGGACCACGAGGTTGCCACGTGTCTCCTGTTGCTTGCCAACGGAGACGCCCCCGCCCCCAGGCATCAGGAGGAGCTTTCCGAAACATCATGTGGGAGTGGGAGGTTCGAGTGCTCTAGGTGCAAGAAAGTGTTTGGGTCCCACCAGGCCCTGGGAGGTCACAGGGCTACTCACAAGAACGTCAAGGGCTGTTTTGCGAATGCCGTAAGCACAACAAATGAGTATAACGCTTGTCACGCTGATATTCATGATGAACCAGATAATGAGATGATGATGGTGTTGGAAGGCCACAAGTGCAGCATATGCCTCAGGGTGTTCTCCAGTGGGCAGGCCCTCGGAGGCCACAAGAGGTGTCACTGGGACAAGCCCGAGCCCGAGCCCGAGCCCGAGCCCGACATAGCCCCACGTGCCCTCATTGCTTCCGCAAAAGAAGCATCGTGTGGGCTCGACTTGAACTTGCCTGCCCCACTTCAACATGACTCCTCCTCTCCCCTGCCTTTGGATTTAAGATTGGGACTTTAA 804 0.5597 MSNSDSPSATTCVNQMQKHHSRNPRKKRSRLITIVDHHKQADMVTRPCSECGKKFWSWKALFGHMRCHPERQWRGINPPPNLLRQPPPSPEMTPEDHEVATCLLLLANGDAPAPRHQEELSETSCGSGRFECSRCKKVFGSHQALGGHRATHKNVKGCFANAVSTTNEYNACHADIHDEPDNEMMMVLEGHKCSICLRVFSSGQALGGHKRCHWDKPEPEPEPEPDIAPRALIASAKEASCGLDLNLPAPLQHDSSSPLPLDLRLGL 267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa01g4207 267 ProSitePatterns Zinc finger C2H2 type domain signature. 132 152 IPR013087 -
Bisa01g4207 267 PANTHER ZINC FINGER PROTEIN ZAT2-RELATED 24 267 - -
Bisa01g4207 267 ProSitePatterns Zinc finger C2H2 type domain signature. 193 213 IPR013087 -
Bisa01g4207 267 Pfam C2H2-type zinc finger 47 70 - -
Bisa01g4207 267 Pfam C2H2-type zinc finger 191 216 - -
Bisa01g4207 267 Pfam C2H2-type zinc finger 129 153 - -
Bisa01g4207 267 SMART c2h2final6 191 213 IPR013087 -
Bisa01g4207 267 SMART c2h2final6 46 68 IPR013087 -
Bisa01g4207 267 SMART c2h2final6 130 152 IPR013087 -
Bisa01g4207 267 MobiDBLite consensus disorder prediction 1 29 - -
Bisa01g4207 267 SUPERFAMILY beta-beta-alpha zinc fingers 47 152 IPR036236 -
Bisa01g4207 267 ProSiteProfiles Zinc finger C2H2 type domain profile. 130 157 IPR013087 -
Bisa01g4207 267 ProSitePatterns Zinc finger C2H2 type domain signature. 48 68 IPR013087 -
Bisa01g4207 267 ProSiteProfiles Zinc finger C2H2 type domain profile. 191 218 IPR013087 -
Bisa01g4207 267 Gene3D Classic Zinc Finger 127 213 - -
Bisa01g4207 267 MobiDBLite consensus disorder prediction 1 18 - -
Bisa01g4207 267 ProSiteProfiles Zinc finger C2H2 type domain profile. 46 73 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa01g4207 Bisa-ChrBisa01 100476729 100477532 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa01g4207 3 267 C2H2 Transcription Factor Family AT2G17180 44.444 1.59e-74 226
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Bisa01g4207 zf-C2H2_6 3.4e-12 CL0361