Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa01g4184 ATGGGAGAAGGAGGCGACATCGAACTTCCAGGCTTCCGTTTTCACCCAACCGAAGAAGAACTGCTTGAATTCTATCTTAAAAACATGATCACCGGCAAGAAACTGCGTTTCGACATCATCGACTTCCTCAACATCTATCACCATGATCCCTGGGATTTGCCAGGTATGGCGAAGGTGGGGGAAAGGGAATGGTACTTCTTTGTGCCCAGAGATAAGAAGCATGGGAGCGGAGGAAGGCCGAACCGGACCACCCAGAAAGGGTTTTGGAAAGCCACCGGTTCAGACCGGAAAATCGTTAGCTTATCGGAGCCGAAGCGGATCATTGGGTTCAAAAAGACTTTGGTTTTCTACGAGGGAAGAGCTCCACGTGGATGTAAGACCGACTGGGTCATGAACGAATACCGCTTGCCCGACACTGTCCCCTTCCCTAATAAGGACAAGATAGTGCTGTGCAAGATATACCGAAAAGCGACATCGTTGAAAGTGTTGGAGCAAAGGGCGGCGATGGAGGAAGAGATGAAGCAAATGGGAAGGTGTTGTTCTTCGCCTCCGTCTCCTCCTTCCTCAAACGACACCGTATCTTTCACCACCCAACCGGAGATGCCGTTACAACTGAAGAAGGAAGAGGAAGAAGTGGTGGAAGTAGCACAAGAAAATATGACTAACCAAATAGACATCAAAGAAAAAGGAACTAGCAGTTGTGGCAGTAAGTCAGTGCAATTGGGCTTTGGAAAGGATAAGCTGCAAGAACTCCAAATACCCATCCCCATGATGACTATGGATTGGGCCCAAGATCCTATCTGGGCCCAATTAAATAGTCCTTGGTTACAATGTTTGACTCCTTACTCCAACCTCTTAAACTTTTAG 867 0.4775 MGEGGDIELPGFRFHPTEEELLEFYLKNMITGKKLRFDIIDFLNIYHHDPWDLPGMAKVGEREWYFFVPRDKKHGSGGRPNRTTQKGFWKATGSDRKIVSLSEPKRIIGFKKTLVFYEGRAPRGCKTDWVMNEYRLPDTVPFPNKDKIVLCKIYRKATSLKVLEQRAAMEEEMKQMGRCCSSPPSPPSSNDTVSFTTQPEMPLQLKKEEEEVVEVAQENMTNQIDIKEKGTSSCGSKSVQLGFGKDKLQELQIPIPMMTMDWAQDPIWAQLNSPWLQCLTPYSNLLNF 288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa01g4184 288 Gene3D NAC domain 17 160 IPR036093 GO:0003677|GO:0006355
Bisa01g4184 288 ProSiteProfiles NAC domain profile. 8 156 IPR003441 GO:0003677|GO:0006355
Bisa01g4184 288 SUPERFAMILY NAC domain 9 156 IPR036093 GO:0003677|GO:0006355
Bisa01g4184 288 FunFam NAC domain-containing protein 67-like 17 160 - -
Bisa01g4184 288 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 9 215 - -
Bisa01g4184 288 Pfam No apical meristem (NAM) protein 10 136 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa01g4184 Bisa-ChrBisa01 100125881 100126933 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa01g4184 4 285 NAC Transcription Factor Family AT2G17040 58.763 4.43e-111 320
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Bisa01g4184 NAM 1.9e-35 No_clan