Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa01g4182 ATGCCTTCCTTCGTCTTCTTCTTCTTCTTCTTCCTCCTTCTCGTTTCTTCTGCTTCTGCCTGCGACAGCTGTCTCCACCAATCCAAGGCTGCCTTCTTCTCCAAAGCCTCCGCTCTTTCATCTGGCGCGTGCGGATATGCCTCCCTGGCTCTGCAATTAAGTGGCGGACACCTTGCCGCTGCTGTGCCTTCCCTCTACAAAAACGGAGCCGGTTGCGGCGCCTGCTTTCAGATAAGATGCAAGAACCCGAGTGTGTGCACAAAAGCAGGAACCACAGTGATCGTCACCGATCTCAACACCAACAATCAAACCGATTTGGTCCTCAGCAGTAGAGCTTTCATGGCCATGGCTCAAAAGGGTATGGCTCAACAAATTTTGAAGCTTGGAATCGTCGACGTTGAATACAAGAGGGTGGCGTGTGAATATAAAAACAAGAACTTGCAAGTGCGGGTGGAAGAATCAAGCAAGAAACCGAACTACTTGGCAATTAAATTCCTGTATCAAGGAGGGCAAACTGAGATTGTAGGTGTTGATGTAGCTCAGGTGGGGTATTCTCCGAACTGGAGTTACATGAGCAGAAAGAGTGGAGGAGCTATATGGGAAACAGATAGGGTTCCGGCAGGGGCGTTGCAGATGAGGATGGTGGTGACGGCGGGGTACGACGGCAAGTGGATATGGGCGAAGAAGGTGCTGCCTGCAGATTGGGAAGTAGGGGCTGTCTATGACTCTGGCCTTCAAATCACCGATGTTGCAAAAGAGGGATGTTCTTCCTGCGACGATGACCATTTCTGGTCATAG 798 0.5063 MPSFVFFFFFFLLLVSSASACDSCLHQSKAAFFSKASALSSGACGYASLALQLSGGHLAAAVPSLYKNGAGCGACFQIRCKNPSVCTKAGTTVIVTDLNTNNQTDLVLSSRAFMAMAQKGMAQQILKLGIVDVEYKRVACEYKNKNLQVRVEESSKKPNYLAIKFLYQGGQTEIVGVDVAQVGYSPNWSYMSRKSGGAIWETDRVPAGALQMRMVVTAGYDGKWIWAKKVLPADWEVGAVYDSGLQITDVAKEGCSSCDDDHFWS 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa01g4182 265 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 41 145 IPR007112 -
Bisa01g4182 265 SUPERFAMILY Barwin-like endoglucanases 11 144 IPR036908 -
Bisa01g4182 265 Gene3D - 14 141 IPR036908 -
Bisa01g4182 265 ProSiteProfiles Expansin, Cellulose-binding-like domain profile. 159 243 IPR007117 -
Bisa01g4182 265 SUPERFAMILY PHL pollen allergen 145 243 IPR036749 -
Bisa01g4182 265 Pfam Expansin C-terminal domain 148 232 IPR007117 -
Bisa01g4182 265 Gene3D - 142 248 IPR036749 -
Bisa01g4182 265 Pfam Lytic transglycolase 60 135 IPR009009 -
Bisa01g4182 265 PANTHER EXPANSIN-B3 13 246 - -
Bisa01g4182 265 PRINTS Major pollen allergen Lol pI signature 80 90 IPR005795 GO:0005576|GO:0019953
Bisa01g4182 265 PRINTS Major pollen allergen Lol pI signature 150 165 IPR005795 GO:0005576|GO:0019953
Bisa01g4182 265 PRINTS Major pollen allergen Lol pI signature 219 236 IPR005795 GO:0005576|GO:0019953
Bisa01g4182 265 PRINTS Major pollen allergen Lol pI signature 166 181 IPR005795 GO:0005576|GO:0019953
Bisa01g4182 265 PRINTS Major pollen allergen Lol pI signature 117 132 IPR005795 GO:0005576|GO:0019953
Bisa01g4182 265 SMART dpbb_1 59 135 IPR007112 -
Bisa01g4182 265 CDD DPBB_EXLA_N 18 142 - -
Bisa01g4182 265 PRINTS Expansin/Lol pI family signature 40 58 IPR007118 GO:0005576
Bisa01g4182 265 PRINTS Expansin/Lol pI family signature 128 144 IPR007118 GO:0005576
Bisa01g4182 265 PRINTS Expansin/Lol pI family signature 229 243 IPR007118 GO:0005576
Bisa01g4182 265 PRINTS Expansin/Lol pI family signature 62 80 IPR007118 GO:0005576
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa01g4182 Bisa-ChrBisa01 100097527 100099707 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa01g4182 1 265 Expansin Gene Family AT3G45960 63.296 4.57e-114 327