Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa01g4167 ATGATTATGGATCAGGACGACCGGAGCTGCGCAAGCAGAGTACACGATACGTCGCCATTGGCTCAAAGTCGGCAACAGAACCAGAAGCTTCAAGTGTACTATGAGGTTCTCCATCGCCTCAAGAATTCCAACAACGACGAGACTATGCAGCCTGGCTTCGACCATCAACTTTGGGCTCACTTCAACCGCCTCCCAACACGGTATGCGCTGGATGTTAATGTGGAAAGGACGGCAGATGTTCTCACTCATAAGAGACTACTGCATTTGGCACATGATCCTGCTAATAGGCCTGCATTTGAAGTTCGTCTGGTTCAGGTCTATCCCATATCTGAGGGGAATTCAGATGTGCTTAGGGAAGAAGCTTGTCAAAAATGTTCAGAGTATTCAAGCAGACAGGGTATACATCCTCCTCCTGCTTTTGGTTCTCCTCCTAATCTTGAAGCCTTGGCACTTGAAGCAAATAATTCTGAAGATCTAGAGGAGGAACATTCTGTACATGGCAGTGCTAAATATTCACTACGGCCCATGCATGAAATCACCTTCTCTTCAGATGACAAGCCAAAGCTTCTCAGTCAGTTGACTTCTTTGCTTGCTGAAATTGGACTAAACATCCAAGAAGCACATGCTTTTTCCACTACTGATGGCTACTCATTAGATGTGTTCGTTGTTGATGGATGGCCCTATGAGGAAACAGATCAACTTAAAGCAGCTGTGGAAAAAAAAGTATTGATGATTGAGAGGCAAGCGTGTCCTATTCAGAAATCAGAATTTTATGTTGGCAAGACTAATCTAGAAGCGATGAAATGTGAAGAAGGTCATTTGACAATACCAAATGATGGGGTAGATGTTTGGGAAATAGAACCTAAACATTTGAAATATGGAAATAAAATTGCATCGGGGGCATTTGGTGAACTGTTTCAAGGTACATATTGTAGTCAGGAAGTGGCCATTAAGGTTCTCAAGACTGAGCATGTAAGTTCAGAATGGCAGAAAGAATTTTCCCAGGAAGTCTATATCATGAGAAAGGTTAGGCACAAGAATGTTGTACAATTTATTGGAGCATGTACCAAGCCACCGCACTTGTGCATAATAACAGAATTTATGTCTGGTGGAAGTGTGTATGACTATTTGCATAAGCAGAAGGGTGTTTTTAAATTTCCAACCGTACTCAAAGTAGCAATTGATGTTTCTAAGGGAATGAACTACTTGCACCAAAATAACATTATCCATAGAGATTTGAAGGCTGCCAATCTTTTGATGGATGAAAATCAAGTTGTCAAGGTTGCTGATTTTGGGGTTGCTAGAGTGAAAGATCAATCTGGAGTTATGACAGCAGAAACTGGAACATATCGATGGATGGCTCCTGAGGTTATAGAACACAAAACATATGATCAAAAGGCGGATGTATTTAGTTTTGGAGTTGTTCTATGGGAGTTGCTCACTGGAAAGCTTCCATATGACTATTTGACCCCACTACAGGCAGCTATAGGCGTTGTTCAAAAGGGCCTGCGACCCACCATCCCCAAGAACACTCATCCAAAATTTTCTGAGCTTCTTCAGAGGTGTTGGCAGCATGAGCCAACATTAAGACCTGATTTCTCTGAAATTATTGAGATCTTGCAGCAATTAGCTATGGAGGTTGGAAATGATGGAGAAGAAAAGCGGAGGGAGAAATCAGGAGGATTTTTTTCTTCCCTCAGACGAGGTCATCACTGA 1716 0.4225 MIMDQDDRSCASRVHDTSPLAQSRQQNQKLQVYYEVLHRLKNSNNDETMQPGFDHQLWAHFNRLPTRYALDVNVERTADVLTHKRLLHLAHDPANRPAFEVRLVQVYPISEGNSDVLREEACQKCSEYSSRQGIHPPPAFGSPPNLEALALEANNSEDLEEEHSVHGSAKYSLRPMHEITFSSDDKPKLLSQLTSLLAEIGLNIQEAHAFSTTDGYSLDVFVVDGWPYEETDQLKAAVEKKVLMIERQACPIQKSEFYVGKTNLEAMKCEEGHLTIPNDGVDVWEIEPKHLKYGNKIASGAFGELFQGTYCSQEVAIKVLKTEHVSSEWQKEFSQEVYIMRKVRHKNVVQFIGACTKPPHLCIITEFMSGGSVYDYLHKQKGVFKFPTVLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENQVVKVADFGVARVKDQSGVMTAETGTYRWMAPEVIEHKTYDQKADVFSFGVVLWELLTGKLPYDYLTPLQAAIGVVQKGLRPTIPKNTHPKFSELLQRCWQHEPTLRPDFSEIIEILQQLAMEVGNDGEEKRREKSGGFFSSLRRGHH 571
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa01g4167 571 ProSiteProfiles Protein kinase domain profile. 291 544 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa01g4167 571 Gene3D Phosphorylase Kinase; domain 1 280 369 - -
Bisa01g4167 571 MobiDBLite consensus disorder prediction 549 571 - -
Bisa01g4167 571 FunFam Serine/threonine-protein kinase isoform 1 281 369 - -
Bisa01g4167 571 SUPERFAMILY Protein kinase-like (PK-like) 276 540 IPR011009 -
Bisa01g4167 571 PRINTS Tyrosine kinase catalytic domain signature 511 533 IPR001245 GO:0004672|GO:0006468
Bisa01g4167 571 PRINTS Tyrosine kinase catalytic domain signature 467 489 IPR001245 GO:0004672|GO:0006468
Bisa01g4167 571 PRINTS Tyrosine kinase catalytic domain signature 402 420 IPR001245 GO:0004672|GO:0006468
Bisa01g4167 571 PRINTS Tyrosine kinase catalytic domain signature 365 378 IPR001245 GO:0004672|GO:0006468
Bisa01g4167 571 PRINTS Tyrosine kinase catalytic domain signature 448 458 IPR001245 GO:0004672|GO:0006468
Bisa01g4167 571 MobiDBLite consensus disorder prediction 1 26 - -
Bisa01g4167 571 Pfam Protein tyrosine and serine/threonine kinase 291 540 IPR001245 GO:0004672|GO:0006468
Bisa01g4167 571 CDD ACT_TyrKc 176 243 - -
Bisa01g4167 571 MobiDBLite consensus disorder prediction 549 564 - -
Bisa01g4167 571 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 145 548 - -
Bisa01g4167 571 SMART serkin_6 291 545 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa01g4167 571 CDD STKc_MAP3K-like 297 540 - -
Bisa01g4167 571 Gene3D Transferase(Phosphotransferase) domain 1 370 561 - -
Bisa01g4167 571 FunFam serine/threonine-protein kinase HT1 370 560 - -
Bisa01g4167 571 SUPERFAMILY ACT-like 176 241 IPR045865 -
Bisa01g4167 571 ProSitePatterns Serine/Threonine protein kinases active-site signature. 408 420 IPR008271 GO:0004672|GO:0006468
Bisa01g4167 571 ProSiteProfiles ACT domain profile. 178 252 IPR002912 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa01g4167 Bisa-ChrBisa01 99742405 99749523 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa01g4167 2 570 MAP Kinase Kinase Kinase AT4G35780 63.212 0.0 721
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Bisa01g4167 PK_Tyr_Ser-Thr 2.5e-76 CL0016