Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa01g4154 ATGACTCATTCACACGTCACCCACTCCGCCTCAATTACTGTTTTGCATCACAAGAACCAACACTTTTCATTGATAACGGCAGTGTTAACATGGGCTGTGGGGATCTGTATCTCTGTCCATCCTTCCGCTTGCCAATATCTCAGTTCAAACATGGGTGCGGCTGAAAACAATCTTGATGTGGAGGAGGGAACTTTGGAGATAGGAATGGAATACAGAACTGTATCTGGAGTTGCTGGGCCATTGGTCATTCTTGATAAAGTTAAGGGACCCAAATATCAAGAGATAGTTAATATTCGTTTAGGAGATGGATCTACTCGTCGTGGGCAGGTTCTAGAAGTTGATGGCGAAAAGGCTGTTGTTCAGGTCTTTGAAGGGACATCTGGGATTGACAATAAATTTACAACTGTGCAATTTACTGGAGAGGTGTTGAAAACTCCTGTCTCACTCGACATGCTGGGGCGCATATTTAATGGTTCTGGAAAACCAATTGATAATGGTCCACCTATTTTGCCAGAGGCTTACTTGGATATATCAGGGAGTTCCATCAACCCTAGTGAGAGAACCTATCCCGAGGAGATGATACAGACCGGAATATCTACAATTGATGTCATGAACTCCATCGCTCGAGGTCAAAAGATCCCTCTTTTCTCAGCTGCTGGTCTTCCCCATAATGAAATTGCTGCTCAAATATGTCGCCAGGCTGGCTTAGTTAAGCGATTGGAGAAGTCTGATAATCTTCTTGAGGATGCAGGAGAGGACAATTTTGCCATTGTATTTGCAGCTATGGGAGTTAACATGGAGACTGCACAGTTTTTCAAACGTGATTTTGAGGAGAATGGCTCAATGGAGAGAGTGACACTTTTTCTTAATCTGGCAAATGATCCCACAATTGAGCGTATCATCACTCCTCGTATTGCTCTTACTACTGCTGAATATTTGGCATATGAATGCGGGAAGCATGTTCTTGTGATACTCACAGATATGAGTTCTTATGCTGATGCTCTTCGTGAGGTGTCTGCTGCCCGAGAAGAAGTGCCAGGAAGGCGTGGGTATCCTGGTTACATGTATACAGATCTTGCAACAATCTATGAACGTGCTGGAAGAATTGAGGGGCGGAAAGGATCTATTACACAAATTCCAATCCTAACCATGCCTAATGATGATATTACACATCCAACTCCTGATCTTACAGGATACATTACTGAGGGGCAGATATACATAGATAGACAGCTGCATAACAGACAGATATACCCGCCAATCAATGTCCTTCCATCGCTATCTCGGTTGATGAAGAGTGCCATTGGTGAGGGAATGACTCGGAGGGATCATTCTGATGTTTCCAACCAGCTCTACGCAAATTATGCCATTGGAAAGGATGTCCAGGCAATGAAAGCTGTGGTTGGAGAAGAAGCACTTTCATCTGAGGATCTGCTGTACCTGGAATTTTTGGACAAATTTGAGAGGAAATTTGTTACCCAAGGAGCTTACGACACGCGCAATATTTTCCAGTCATTAGATGTTGCATGGACTTTACTTCGGATTTTCCCCCGTGAGCTTCTTCATCGTATACCAGCAAAGACCCTTGACCAGTTTTATAGCCGAGATGCTGGTAATTGA 1617 0.4372 MTHSHVTHSASITVLHHKNQHFSLITAVLTWAVGICISVHPSACQYLSSNMGAAENNLDVEEGTLEIGMEYRTVSGVAGPLVILDKVKGPKYQEIVNIRLGDGSTRRGQVLEVDGEKAVVQVFEGTSGIDNKFTTVQFTGEVLKTPVSLDMLGRIFNGSGKPIDNGPPILPEAYLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNEIAAQICRQAGLVKRLEKSDNLLEDAGEDNFAIVFAAMGVNMETAQFFKRDFEENGSMERVTLFLNLANDPTIERIITPRIALTTAEYLAYECGKHVLVILTDMSSYADALREVSAAREEVPGRRGYPGYMYTDLATIYERAGRIEGRKGSITQIPILTMPNDDITHPTPDLTGYITEGQIYIDRQLHNRQIYPPINVLPSLSRLMKSAIGEGMTRRDHSDVSNQLYANYAIGKDVQAMKAVVGEEALSSEDLLYLEFLDKFERKFVTQGAYDTRNIFQSLDVAWTLLRIFPRELLHRIPAKTLDQFYSRDAGN 538
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa01g4154 538 Pfam ATP synthase alpha/beta family, beta-barrel domain 74 140 IPR004100 GO:0046034|GO:1902600
Bisa01g4154 538 PIRSF V-ATPsynth_beta/V-ATPase_B 62 538 IPR022879 -
Bisa01g4154 538 CDD ATP-synt_V_A-type_beta_C 437 531 - -
Bisa01g4154 538 PANTHER V-TYPE PROTON ATPASE SUBUNIT B 54 535 IPR022879 -
Bisa01g4154 538 Hamap V-type ATP synthase beta chain [atpB]. 68 536 IPR022879 -
Bisa01g4154 538 FunFam V-type proton ATPase subunit B, brain 79 538 - -
Bisa01g4154 538 Pfam ATP synthase alpha/beta family, nucleotide-binding domain 197 427 IPR000194 GO:0005524
Bisa01g4154 538 ProSitePatterns ATP synthase alpha and beta subunits signature. 418 427 IPR020003 GO:0005524
Bisa01g4154 538 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 144 433 IPR027417 -
Bisa01g4154 538 Gene3D - 79 537 - -
Bisa01g4154 538 CDD ATP-synt_V_A-type_beta_N 70 141 - -
Bisa01g4154 538 CDD V_A-ATPase_B 142 435 - -
Bisa01g4154 538 NCBIfam V-type ATPase subunit B 70 536 IPR005723 GO:0033180|GO:0046961|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa01g4154 Bisa-ChrBisa01 99594137 99601212 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa01g4154 47 538 Primary Pumps ATPases(2) AT4G38510 96.545 0.0 976