Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa01g4147 ATGAACATCATCACTCAGAACTTGTCTGAGAGACTGAGGCCTCTTGTGGGTTTCAATGGCTGGGACTACTGTGTTTACTGGAAATTAAATGAAGACCAGAGGTTTCTTGAATGGATGGGATGCTCATGTGCTGGGACTGAAAGTAGCCAAAATGGTGGAGAAGAACTTCTTTTCCCTGTTTCCTCAGCTTCTTCATGCAGAGACACAGTGTTTCCTCATCCCAGAACAAAGCCTTGTGCTCTACTTTCTCAACTTCCCACTTCCTTACCTCTAGATTCTGGGATTTATGCAGAGACACTACTGTCAAACCAACCCAATTGGGCGAACTATTCCAACAGCTTAGATTCAAATACTCTGGAAGAAATAATTGGAACCCAGGTTTTGATTCCAGTCCCAGGTGGACTAGTTGAGCTTTTTGTCACAAAACAAGTACCAGAAGATAATCAGGTGATCGATTTTGTGACAGCACAGTGTAACATTGATATGAGTTTCAACATTGATGTGAACTCAATCAGTCATATGCAATCAAACTTGAATCAACTTATACCAGGTGATGAGAATGATGGGAATGCAATAGCCTCAGAGGCTTCAAGTCTTCCTCCATATGAACACTGCAATTCTCCATTGAACTTCATGCAGCAGTTTAATCACAGTAACAACCCACACAACAGATTGAAAAGTGACAATTTCTTCGAGGATTCCCAGGGTTCATTCCTTTTGGACAAAACCCAGCAATTTGGGGACGCATTGGAGAAGAAAGAGCAGCAAGGGGACGACAAGGATTTAATCAAACACGCGGTGGGCAGGTCGGATTCGGTGTCGGATTGCAGCGATCAGAACGAAGAAGAAGATGATGGGAAGTACAGACGTAGAAATGGGAAAGGGAATCAATCCAAGAATCTTCTCGCGGAAAGAAGGAGGAGGAAGAAGCTTAACGATAGCTTGTATAATCTTCGTTCTCTGGTTCCGAGAATCTCGAAGCTAGACAGAGCCTCGATTCTCGGAGACGCGATTGAGTACGTGAAGGATTTGCAGAACCAGGTGAGAGAGCTGCAGGATGAGCTGGAGGAGCATTCCGACATGGGTGTCCAACAACAACAACCAGACAACGTCGTTGGGGTCGAAGGTGGATCGAAAGGAGAACAGATGAAAACCCAGAATGGATTTCATGTGGGGGCATCAGGGAATGGCTATACCTTGAATCAAAAACCGGAATTGGATGCTCCCTGTGACAAGCAGATGCAGCAAATGGAGCCGCAAGTTGAAGTGGCAGTGATAGAAGGGAATGAATTGTTTGTGAAGGTGTTCTGCGAGCATCGACCTGGAGGGTTTGTGAAGCTAATGGAGGCATTCAATACTCTTCGCATGGAAGTCATACATGCAATGGTCACCAGGCACACAGGCCTTGTCTCTAACGTTTTCAAAGTTGAGAGAAAGGAGAATGAAATGGTTGAAGCTGAAGATGTGAGAGAGTCTTTGCTAGAACTTATGAGGAATCCATGCAGAGGGTGGAATTATGAGATGACAACAAACACAGCTTCAGAAAATGCAGTGACAAGGGACTATCATCATCATCATCATCAACAACAACAACAACATCAACATATTCAATACTCTTCACATGGAAGTCATACATGCAACAGTCACCAGGCACACAGGCCTCGTCTCTAA 1671 0.4446 MNIITQNLSERLRPLVGFNGWDYCVYWKLNEDQRFLEWMGCSCAGTESSQNGGEELLFPVSSASSCRDTVFPHPRTKPCALLSQLPTSLPLDSGIYAETLLSNQPNWANYSNSLDSNTLEEIIGTQVLIPVPGGLVELFVTKQVPEDNQVIDFVTAQCNIDMSFNIDVNSISHMQSNLNQLIPGDENDGNAIASEASSLPPYEHCNSPLNFMQQFNHSNNPHNRLKSDNFFEDSQGSFLLDKTQQFGDALEKKEQQGDDKDLIKHAVGRSDSVSDCSDQNEEEDDGKYRRRNGKGNQSKNLLAERRRRKKLNDSLYNLRSLVPRISKLDRASILGDAIEYVKDLQNQVRELQDELEEHSDMGVQQQQPDNVVGVEGGSKGEQMKTQNGFHVGASGNGYTLNQKPELDAPCDKQMQQMEPQVEVAVIEGNELFVKVFCEHRPGGFVKLMEAFNTLRMEVIHAMVTRHTGLVSNVFKVERKENEMVEAEDVRESLLELMRNPCRGWNYEMTTNTASENAVTRDYHHHHHQQQQQHQHIQYSSHGSHTCNSHQAHRPRL 556
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa01g4147 556 Pfam Helix-loop-helix DNA-binding domain 302 345 IPR011598 GO:0046983
Bisa01g4147 556 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 297 359 IPR036638 GO:0046983
Bisa01g4147 556 MobiDBLite consensus disorder prediction 251 268 - -
Bisa01g4147 556 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 295 344 IPR011598 GO:0046983
Bisa01g4147 556 Coils Coil 334 361 - -
Bisa01g4147 556 Gene3D - 284 360 IPR036638 GO:0046983
Bisa01g4147 556 CDD bHLH_AtAMS_like 298 362 - -
Bisa01g4147 556 MobiDBLite consensus disorder prediction 251 306 - -
Bisa01g4147 556 PANTHER TRANSCRIPTION FACTOR SCREAM2-RELATED 142 497 - -
Bisa01g4147 556 MobiDBLite consensus disorder prediction 532 547 - -
Bisa01g4147 556 Coils Coil 476 496 - -
Bisa01g4147 556 SMART finulus 301 350 IPR011598 GO:0046983
Bisa01g4147 556 MobiDBLite consensus disorder prediction 522 556 - -
Bisa01g4147 556 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 8 155 IPR025610 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa01g4147 Bisa-ChrBisa01 99529350 99533556 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa01g4147 6 525 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G16910 47.070 8.50e-151 443
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Bisa01g4147 bHLH-MYC_N 1.4e-19 CL0161