Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa01g4145 ATGAGGCAAGGAAGGGAGGAAAAGGGAACGGCTTCGACGAACCATGGAGCAGAAAGGAAGGTCGATGCCACAGGAGCGAAGAAGACAGTAAGAGGAGAGAGGAAGGGCTTCAATGGCGACTTAGGGATGAGAGATGATGTCGATGTTGTAGAGGAGAGACGATGTCTTCGATGGTGCTGTGCATTTTTCTCTCTTCCCAAACGATGGCAGCGACTACAAACTGGCGGCAACAGGAGATGGCAGCTTCTTCTTCTTCTTCTTCTTCTTCTTTGTATCATTCTTCGGCTATGGCAACAGTTACAAACTGGCAGCGACGGGAGCTTCTTCTTCTTCTTTGTATCATTCTTCAGCTATGGCAACCGCCACAAACTTGCGACGATGGGAGATGAAGTGGCTGGAGCTGATTGTGAAATGAACATCACTCAGAACTTGTCTGAGAGACTGAGGCTTCTTGTGGGTTTCAATGGCTGGGACTACTGTGTTTTCTGGAAATTAAGTGAAGACCAGAGGCTAACTCATCAACTGAACTCACATTTTCTTATCATTCTTCCATTAATATTCTGCTCTTTCATCTTCCTTCTCTTGCTCTGTTCAAGTGCCGTTTCCCCTTTTTGGAGTTATAAGAGAAACTCCATTGAAGCAGAGCATCGAAGAAGGAAGAGAAACTCCATTGAAGCAGAGCATCGAAGAAGGACGAAGCTTTACAATAACTTGTGTATTCTTCGGTCTCTGGTTCCGACAATCTCGAAGCTAGACAGAGCCTCGATTCTCGGAGACGCGATCCAGTTCGTGAAGCACTTACAGAAGCAGGTGAAGGAGCTGCAGGATGAGCTGGAGAAGCATTCCGACATGGGTGTGCAACAACAACAACAACCAGACAACGTCGTTGGGGTCGAAGGTGGATCGAAAGGAGAACAGATGAAAACCCAGAATGGATTTCCTGTGGGGACATCAGGGAATGGCTATCCCTTGAAGCAAAAACAGGAATTGGATGCTCCTTGTGACAAGCAGACGCAGCAAATGGAGCCGCAAGTTGAAGTGGAAGTGAAAGAAGGGAATGAATTGTTTGTGAAGGTGTTCTACAAGCATCGACCTGGAAGGTTTGTGAAGCTGATGGAGGCATTCAATACTCTTCACATGGAAGTCATACATACAACAGTCACCAGGCACACCAGCATCGTCTTTAATGTTTTCAAAGTTGAGAGAAAGGAGAATCAAATGGTTGAAGCTGAAGATTTGAGAGAGTCTTTGCTAGAACTTATGAGGAATCCATGTAGAGGGTGGAACTTATGA 1293 0.4594 MRQGREEKGTASTNHGAERKVDATGAKKTVRGERKGFNGDLGMRDDVDVVEERRCLRWCCAFFSLPKRWQRLQTGGNRRWQLLLLLLLLLCIILRLWQQLQTGSDGSFFFFFVSFFSYGNRHKLATMGDEVAGADCEMNITQNLSERLRLLVGFNGWDYCVFWKLSEDQRLTHQLNSHFLIILPLIFCSFIFLLLLCSSAVSPFWSYKRNSIEAEHRRRKRNSIEAEHRRRTKLYNNLCILRSLVPTISKLDRASILGDAIQFVKHLQKQVKELQDELEKHSDMGVQQQQQPDNVVGVEGGSKGEQMKTQNGFPVGTSGNGYPLKQKQELDAPCDKQTQQMEPQVEVEVKEGNELFVKVFYKHRPGRFVKLMEAFNTLHMEVIHTTVTRHTSIVFNVFKVERKENQMVEAEDLRESLLELMRNPCRGWNL 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa01g4145 430 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 218 267 IPR011598 GO:0046983
Bisa01g4145 430 SMART finulus 224 273 IPR011598 GO:0046983
Bisa01g4145 430 Coils Coil 257 291 - -
Bisa01g4145 430 PANTHER TRANSCRIPTION FACTOR SCREAM2-RELATED 218 421 - -
Bisa01g4145 430 Pfam Helix-loop-helix DNA-binding domain 219 268 IPR011598 GO:0046983
Bisa01g4145 430 Coils Coil 400 423 - -
Bisa01g4145 430 Gene3D - 210 283 IPR036638 GO:0046983
Bisa01g4145 430 MobiDBLite consensus disorder prediction 1 25 - -
Bisa01g4145 430 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 218 282 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa01g4145 Bisa-ChrBisa01 99346709 99354633 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa01g4145 226 428 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G16910 48.039 9.77e-49 173
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Bisa01g4145 HLH 7.9e-07 No_clan