Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa01g4144 ATGAAAAACTCCAGTCACGAGGTCGTTGGGGGTGAAATGAACATCATCACTCAGAACTTATCTCATAGACTGAGGACTCTCGTGCGTTTCAATGGCTGTGACTACTTTGTTTACTGGAAGTTAAGTGAAGACCAGAGTTATAAGGGAAACTCCATTGACGCAGAGCATCGAAGAAGGACGAAGCTCTTGGACAGATTGTATCTCCTTCGCTCTGTGGTTCCTTTTGGAGGTTCTAATCTAGGCAAGAACTCCATTCTTTTCGACACAATTGAGTTCGCCAGGGATTCGGAGAAGCAAGTCGAAGATCTGGACGATAAGCTTAAAGGGCATCCAGATAGTATCGTTGTGGTTGACGATGGTGAACCAAAAGCTAAACAAATAATTAACACGCAACAAATGGAGGTATCTTATATGACCCATTTGTGA 426 0.4319 MKNSSHEVVGGEMNIITQNLSHRLRTLVRFNGCDYFVYWKLSEDQSYKGNSIDAEHRRRTKLLDRLYLLRSVVPFGGSNLGKNSILFDTIEFARDSEKQVEDLDDKLKGHPDSIVVVDDGEPKAKQIINTQQMEVSYMTHL 141
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa01g4144 141 PANTHER TRANSCRIPTION FACTOR SCREAM2-RELATED 48 134 - -
Bisa01g4144 141 Gene3D - 39 110 IPR036638 GO:0046983
Bisa01g4144 141 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 46 96 IPR011598 GO:0046983
Bisa01g4144 141 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 43 107 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa01g4144 Bisa-ChrBisa01 99313574 99314375 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa01g4144 54 111 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G26744 46.552 5.27e-09 51.6