Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa01g4128 ATGACTATTGCGACGAGAGATGTGTTGGTGGGGATTACAATCGATAGCCATAGCAGGCAGCTTCTAAACTGGGCTATTGTCAAAGTTGCAGAACCCGGAGATTGCGTTATTGCAGTTCATGTAGTTAGAAGTTCAGGTCATGTTTCCACAAACAGGACCCTCCTAGATAGTTATTTAGAGGTTTATGAAGGCTTATGTAGGATGAAAAAGATAGGTATCATAGGTGAAATCTTCACAGGAAGCTCCTTCAGAAACATTCTTGCCAGAGAATCAAAGAACCATTCTGCTAAGGCTCTAGTGGTTGGGGGTCGAGGTTCCACAGCTAAATATTGCGCCAAACGACTCCCATCCACCACAGATGTGATGGCCATCCTAGAAGGAAGAATAGTCTTCAGAAGTTGTACCAATATTCAACTACCAGGTCCTATACAAGATCCAAGGCCTAGTCTTACAAGCATAGACAACAAAGAAGTCCTGTCTGAATTTGGTGATTCCGAGGTTTCCACTGTGAAGTCAATACGCAAGGAGTCAAGAGAGGATCCCCCAGAATTGAAGGAGGAAGAAGCATTAGACAGAGTAAAAAGGGACAATATATTGTCTTCTTCAAGATCACTCCCTCTTTCTGCAAGTAACCCTTGTGAGCAGAAGCTAGGATGGCCCTTGCTTCGAAGAGTTAATTCAGGAATCTCAGAAACTCCTCTGACGAGGAACATGTCTGTAGTGCAATGGGTCATGAGCTTACCAGATCGTTCCCCGAAGAAAAGTTCTTTCTCTTCATCCATTGAAGAAAGTCTCTCAGAAAGAGGCACCAGTGACATTGAGGATGAGAGACAGAAAACCAGATCAACTGCTTCATCTGTTGAGCTACCAAAGGAATTGGAGGGGATTTTGGACTTGAGTTCATTTGATTGCAAGTGGTTCAGCCTTCAGGATCTTAAGTCATGGACTTCTCAATTCTCTTCAGGAAACCTGATTGGGAAAGGAGGGAGTAATCGTGTATACAAAGGGATACTCCCCGATGGAAAGCCAATAGCAGTCAAGGTTTCGCAGTCATCAAAAGAAGCCTGGAAAGAATTTGCAAGGGAAGTGCAAGTAATATCCTCATTAAATCACAAAAGCATCACCCCTTTGCTTGGGATTTGCATTCAAGAAAATTCTTTGATCTCTGTTTATGAGTTTTTCCCCAGAGGAAGTTTAGAGCAAAATTTACATGGTAAGAACAAGGAAGGATCTATGTTGTCGTGGGAAATGAGATTCAATGTAGCTCTTGGAATAGCAGAAGCCCTCAATTACCTACACAACGAAACTCCAAAGCCTGTTATACACAGAGATGTCAAGTCTTCAAATATTCTTCTCGCCCATGGATTTGAACCCCAATTAACTGACTTTGGACTAGCAATTTGGGGACCAACAAGTTCATCTTATTTGACTCAAGATGAAGTTGTTGGAACATTTGGATATCTTGCTCCTGAATACTTCATGTATGGGAAAGTAAGTGACAAGATAGATGTGTATGCCTTTGGTGTAGTTCTACTTGAACTAATATCAGGAAGGAAACCAATCATCTCTCAGACTTGCAAAGGACAGGAGAGCTTGGTAGTCTGGGCAAAACCAATAATACAGAGTGGGGATGTTAAAGGCTTATTGGACTCTAATTTGGAAGGGAAGTTTGATGAGACCGAAATGCAGAGAATGGTTAGGGCTGCAAGTCTATGTATTACGCGGTCTTCTCGGCTTCGTCCTAAGATGAACCAGATACTGAAGATCCTAAAAGGAGAAGAAAGCGATGAGAGCAGGTTAAGCGAAGAGCATTCAGACAATCAGGAAAACATAGACGACGAAGTGTATCCAAATTCAAGTGCAGAGTTACACTTGAGTCTGGCGTTACTTGATGTTGATGATAACACTACATCCACATCGTGTAGTAGTAGTACAGAGCGAAGCAACAATCTTTCTTTGGAAGAATACTTGAAAGGACGATGGAGCAGATCATCCAGTTTTGATTAG 2007 0.4215 MTIATRDVLVGITIDSHSRQLLNWAIVKVAEPGDCVIAVHVVRSSGHVSTNRTLLDSYLEVYEGLCRMKKIGIIGEIFTGSSFRNILARESKNHSAKALVVGGRGSTAKYCAKRLPSTTDVMAILEGRIVFRSCTNIQLPGPIQDPRPSLTSIDNKEVLSEFGDSEVSTVKSIRKESREDPPELKEEEALDRVKRDNILSSSRSLPLSASNPCEQKLGWPLLRRVNSGISETPLTRNMSVVQWVMSLPDRSPKKSSFSSSIEESLSERGTSDIEDERQKTRSTASSVELPKELEGILDLSSFDCKWFSLQDLKSWTSQFSSGNLIGKGGSNRVYKGILPDGKPIAVKVSQSSKEAWKEFAREVQVISSLNHKSITPLLGICIQENSLISVYEFFPRGSLEQNLHGKNKEGSMLSWEMRFNVALGIAEALNYLHNETPKPVIHRDVKSSNILLAHGFEPQLTDFGLAIWGPTSSSYLTQDEVVGTFGYLAPEYFMYGKVSDKIDVYAFGVVLLELISGRKPIISQTCKGQESLVVWAKPIIQSGDVKGLLDSNLEGKFDETEMQRMVRAASLCITRSSRLRPKMNQILKILKGEESDESRLSEEHSDNQENIDDEVYPNSSAELHLSLALLDVDDNTTSTSCSSSTERSNNLSLEEYLKGRWSRSSSFD 668
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa01g4128 668 ProSiteProfiles Protein kinase domain profile. 319 600 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa01g4128 668 MobiDBLite consensus disorder prediction 170 192 - -
Bisa01g4128 668 Pfam Protein kinase domain 321 588 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa01g4128 668 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 6 116 - -
Bisa01g4128 668 Gene3D Transferase(Phosphotransferase) domain 1 394 618 - -
Bisa01g4128 668 ProSitePatterns Serine/Threonine protein kinases active-site signature. 440 452 IPR008271 GO:0004672|GO:0006468
Bisa01g4128 668 Gene3D HUPs 2 120 IPR014729 -
Bisa01g4128 668 SUPERFAMILY Protein kinase-like (PK-like) 301 590 IPR011009 -
Bisa01g4128 668 Gene3D Phosphorylase Kinase; domain 1 282 393 - -
Bisa01g4128 668 SMART serkin_6 319 589 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa01g4128 668 MobiDBLite consensus disorder prediction 267 282 - -
Bisa01g4128 668 PANTHER OS08G0249100 PROTEIN 166 623 IPR046958 -
Bisa01g4128 668 MobiDBLite consensus disorder prediction 249 266 - -
Bisa01g4128 668 MobiDBLite consensus disorder prediction 249 286 - -
Bisa01g4128 668 CDD USP_Like 8 124 - -
Bisa01g4128 668 FunFam Putative receptor-like serine/threonine-protein kinase 394 607 - -
Bisa01g4128 668 FunFam probable receptor-like serine/threonine-protein kinase At5g57670 288 393 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa01g4128 Bisa-ChrBisa01 99078269 99082648 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa01g4128 307 667 Trihelix Transcription Factor Family AT1G70460 39.071 8.86e-74 250
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Bisa01g4128 Pkinase 5.1e-41 CL0016