Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa01g4120 ATGGGAAGGTCCCCTTGCTGTGAAAAGGCCCACACCAACAAAGGCGCTTGGACCAAGGAAGAAGACGATCGTCTCATCGCTTACATCCGAGCTCACGGCGAGGGTTGCTGGCGGTCCCTCCCCAAGGCCGCCGGCCTCCTCCGCTGTGGCAAGAGCTGCCGGCTCAGGTGGATCAACTACCTCCGTCCCGACCTCAAGCGCGGCAACTTCACCGAAGAAGAAGACGAGCTCATCATCAAGCTCCATAGCCTTCTGGGAAACAAGTGGTCTCTAATCGCCGGACGATTACCCGGAAGAACCGACAATGAGATTAAGAACTACTGGAACACCCACATCAGAAGGAAGCTTCTGAACAGAGGAATCGACCCTTCCACCCACAGACCCCTCAATGAATCTGCAAATTCCGCTCAAACCAATCAAGAATCCTCCGCCACAATCTCCTTCGCGAAGCAAGAAGAAACCGTGTTCCCGGAGAATCACAAAGACGCAAAACGAGACGTTGTAGAGCGATGCCCTGACTTGAACCTCGAGCTAACGATTAGTCCTCCTCATCAGAACCAGGAGCAAGAGGATCCAGTTCCACCATTGAAGATTAATGGAGGAGGAAGAAGAAACCTCTGTTTCGCTTGCAGTTTGGGGTTGCAGAACAACAAGGATGGCAGCTGTACCTGTAACATCAATGGCGGTTCTGGAAGCAGCAGCACAGGTGGGTACGATTTCTTGGGATTGAAAAATGCCGTTTTGGATTACAGAAGCTTGGAGATGAAATGA 771 0.5201 MGRSPCCEKAHTNKGAWTKEEDDRLIAYIRAHGEGCWRSLPKAAGLLRCGKSCRLRWINYLRPDLKRGNFTEEEDELIIKLHSLLGNKWSLIAGRLPGRTDNEIKNYWNTHIRRKLLNRGIDPSTHRPLNESANSAQTNQESSATISFAKQEETVFPENHKDAKRDVVERCPDLNLELTISPPHQNQEQEDPVPPLKINGGGRRNLCFACSLGLQNNKDGSCTCNINGGSGSSSTGGYDFLGLKNAVLDYRSLEMK 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa01g4120 256 CDD SANT 69 112 IPR001005 -
Bisa01g4120 256 SMART sant 66 114 IPR001005 -
Bisa01g4120 256 SMART sant 13 63 IPR001005 -
Bisa01g4120 256 CDD SANT 16 61 IPR001005 -
Bisa01g4120 256 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 1 175 - -
Bisa01g4120 256 MobiDBLite consensus disorder prediction 125 144 - -
Bisa01g4120 256 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Bisa01g4120 256 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Bisa01g4120 256 Gene3D - 68 151 - -
Bisa01g4120 256 SUPERFAMILY Homeodomain-like 13 108 IPR009057 -
Bisa01g4120 256 Gene3D - 14 66 - -
Bisa01g4120 256 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Bisa01g4120 256 FunFam Myb transcription factor 68 137 - -
Bisa01g4120 256 FunFam MYB-related transcription factor 13 66 - -
Bisa01g4120 256 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Bisa01g4120 256 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Bisa01g4120 256 Pfam Myb-like DNA-binding domain 67 111 IPR001005 -
Bisa01g4120 256 MobiDBLite consensus disorder prediction 120 144 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa01g4120 Bisa-ChrBisa01 98931339 98932238 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa01g4120 1 256 MYB Transcription Factor Family AT4G38620 60.554 1.67e-112 323
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Bisa01g4120 Myb_DNA-binding 3.5e-14 CL0123