Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa01g4116 ATGAAGATAATAGGTTATAGATTGGGAAGAAAAGAGACTACTATAGCAATGCGTAGGGAGATCTCGTTTCTCGGTCAACCGCGATACCTCCTTTCCTTCATTGTTCTCTGCGTGTTCCTCATATTCTCTCTGTCGGTCTCGAAACGGGCTGAGGACAAAGCAGAGGAGGAGCCTGAAATTACGCAGAGAGTATTCTTGGAAGTTGACATTGATGGACAACGTTTTGGTAGGATCGTGATTGGATTATTTGGCCAAGTTGTACCGAAAACTGTGGAAAATTTTAGAGCTTTGTGTACAGGGGAGAAAGGCAAGAATGCCAGTGGCATAAAACTTCGTTATAAAGGAATACCATTTCATCGCATAATATCTGGTTTCATGATTCAGGGCGGAGACATTGTTAATCGTGACGGCAGTGGAAATGAATCTATTTATGGGGGCACCTTTCCTGACGAGAATTTCAAGATAAAACATTCTCATGCTGGAGTTGTATCTATGGTGAATTCTGGACCGGATTCCAATGGCTCGCAGTTTTTTATTACCACAGTGAAGGCTGGCTGGCTGGATGGAGAGCATGTGGTGTTTGGGAAGGTAATTGAAGGCATGGACACTCTGTTTGCAGTGGAAGGAGGAGCTGGAACCTACAATGGGAAACCCAGAAAGAAGGTGGTGATTGCAGACTCTGGTGAGATTCCCAGGAGCCAGTGGGATGAACAAAGATGA 720 0.4458 MKIIGYRLGRKETTIAMRREISFLGQPRYLLSFIVLCVFLIFSLSVSKRAEDKAEEEPEITQRVFLEVDIDGQRFGRIVIGLFGQVVPKTVENFRALCTGEKGKNASGIKLRYKGIPFHRIISGFMIQGGDIVNRDGSGNESIYGGTFPDENFKIKHSHAGVVSMVNSGPDSNGSQFFITTVKAGWLDGEHVVFGKVIEGMDTLFAVEGGAGTYNGKPRKKVVIADSGEIPRSQWDEQR 239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa01g4116 239 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 63 230 - -
Bisa01g4116 239 Gene3D - 49 236 IPR029000 -
Bisa01g4116 239 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 65 229 IPR002130 GO:0000413|GO:0003755
Bisa01g4116 239 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 70 226 IPR002130 GO:0000413|GO:0003755
Bisa01g4116 239 SUPERFAMILY Cyclophilin-like 60 230 IPR029000 -
Bisa01g4116 239 FunFam Peptidyl-prolyl cis-trans isomerase 50 236 - -
Bisa01g4116 239 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 82 97 IPR002130 GO:0000413|GO:0003755
Bisa01g4116 239 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 189 204 IPR002130 GO:0000413|GO:0003755
Bisa01g4116 239 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 176 188 IPR002130 GO:0000413|GO:0003755
Bisa01g4116 239 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 118 130 IPR002130 GO:0000413|GO:0003755
Bisa01g4116 239 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 161 176 IPR002130 GO:0000413|GO:0003755
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa01g4116 Bisa-ChrBisa01 98844437 98852225 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa01g4116 76 227 U-box Gene Family AT5G67530 43.137 2.30e-27 107
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa01g4116 01 98844437 98852225 Bisa01g4116 01 98844437 98852225 ECH