Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa01g4055 ATGTCCGAGTCAACTCGTCCTGACATGGACGAGTCCGCGACGGAAACATCTGAAGTTTCCCAGATTCGGGGAGAGCAAGCGGCGTCTAACGCCAACGGGTCAGTTAAGCAAACACCCGAGCAACTCGTGGCCAGGGCCATAGCTCCTGTGAAGGAGCAGTTCCTTCGTCCTCCTCCGGTTCGGACTTCCTCTGCATCTCAGAACGACGACGTTTCCGAGAAGGTTTCTATTCAATCCGGCGGATTAGGAAAGGAGAAGAAGTCGAAGCGCCAACTCAAGCGTGAGCGTCGTCAGGAACAGAGGTCTGCTAGAAATATCTGTCCCGAAGTTGCAAAAACGGGAGATATCAGTTCATGTCCTTATAATGACAAATGCCGCTTCAGCCATGACTTGGAAGCCTTCAAGGCCCAGAAACCAGCTGATCTAGAGGGAGAATGCCCTTTCTTTAAAGCTGAGGGTTTTTGCCCCTATGGGTTAGCATGTAGATTCTCAAGTACGCACACAGATGGTGTGCCTTCTGGCAATCCGAATGGTCGGAGAAAATATTCTGAAATAAATGGACTGAGCAAAGATGTTCAAAAGCTTTTGTGGAAAAATAAGATGCGTTTCCCTAAGGCAGATGCTAAACTCAAAGCTCTTGGGCTCGTGGGACTGCCTAAGTCAAAAAAGAATGAATTGGAAGATAAGGAGGGTGGCAACACTGAATCAAATAATTGTGACCATCCTGATGATAATGGCTGTTGCGAAGTAACCAATGACTCAAGTTCTAAATTAGAAAGCTCTGCAGAAGTCACAAAAGATGATGGTATGGATGGAAAATTTGAATCTGAATTACTTTGCCCCCAGAAGAGAAGGAAAGTTGAAGAAAATTCTGGTCTTGACGGGGTAGAAAATGAAGGTGTGTTTGTTGCTGACCAAATTGTCGAAAAAAGCTGCATACAAGCTGAACCTGAAGCAGGGATTGACATCATACCCCCTGAAACTGACCTAAGCTTGAAGTTACACCCGCGTGAAAAGAAACTTATTGATTTTAGGGAGAAGTTGTATCTTGCTCCCTTAACAACTGTTGGAAATCTCCCTTTCAGGAGGGTTTGCAAAGTATTAGGAGCTGATGTAACATGTGGTGAAATGGCAATGTGCACAAATCTTTTGCAGGGTCAAGCATCAGAATGGGCATTGCTGAGACGTCATTCATCTGAAGATTTATTTGGTGTACAAATATGTGGGGCATATCCAGATACTGTGGCTCGGACCGTAGAACTTATAGAGCAGGAATGTACAATAGATTTTATCGATATAAATATGGGTTGCCCAATTGATATTGTTGTGAATAAGGGTGCTGGATCTGCTCTTCTTAATAAACCAATGCGGATGAAAAGTATTGTAGCAGTAGCTTCAGGCACGGTGGATAAGCCAATAACTGTGAAGGTAAGGACAGCTTATTTTGAAGGAAAAAATCGCATTGATTCTATTATCGCAGACATTGGCTCTTGGGGGGCCAGTGCAGTAACAATACATGGCAGGTCACGTCAGCAACGCTATAGCAAGCTTGCTGACTGGGACTACATCTACCAGTGTGCCAGGAAGGCCCCTAACGCTTTGCAAGTAGTAGGGAATGGGGATGTTTTTTCTTTTGTTGACTGGAATAAGCACAAGGCTGAATGCTCTGAACTTGCTACTTGCTTGATTGCTCGTGGAGCGCTGATTAAGCCTTGGATAATTACAGAGATCAAGGAACAGAGGCACTGGGATATCAGCTCTGGCGAGCGGTTAAATATTTTGAAAGATTTTGTACATTTTGGCCTTGAACACTGGGGCTCTGACACAAAAGGAGTGGAGACAACCAGACGTTTTTTGTTGGAATGGCTTAGCTACACATGTAGATATATACCTGTTGGCCTTTTAGATGTTATTCCACAACGACTAAACTGGCGTCCACCATCCTACTATGGGCGTGATGACCTTGAGACCCTAATGGCCTCTGACTCTGCAGCTGACTGGGTACGGCTATCAGAGATGTTACTTGGCAAGGTTCCAGATGGGTTTACATTTTCACCAAAGCATAAATCAAATGCTTACGATAGTGCTGAAAATGGTTGA 2100 0.4467 MSESTRPDMDESATETSEVSQIRGEQAASNANGSVKQTPEQLVARAIAPVKEQFLRPPPVRTSSASQNDDVSEKVSIQSGGLGKEKKSKRQLKRERRQEQRSARNICPEVAKTGDISSCPYNDKCRFSHDLEAFKAQKPADLEGECPFFKAEGFCPYGLACRFSSTHTDGVPSGNPNGRRKYSEINGLSKDVQKLLWKNKMRFPKADAKLKALGLVGLPKSKKNELEDKEGGNTESNNCDHPDDNGCCEVTNDSSSKLESSAEVTKDDGMDGKFESELLCPQKRRKVEENSGLDGVENEGVFVADQIVEKSCIQAEPEAGIDIIPPETDLSLKLHPREKKLIDFREKLYLAPLTTVGNLPFRRVCKVLGADVTCGEMAMCTNLLQGQASEWALLRRHSSEDLFGVQICGAYPDTVARTVELIEQECTIDFIDINMGCPIDIVVNKGAGSALLNKPMRMKSIVAVASGTVDKPITVKVRTAYFEGKNRIDSIIADIGSWGASAVTIHGRSRQQRYSKLADWDYIYQCARKAPNALQVVGNGDVFSFVDWNKHKAECSELATCLIARGALIKPWIITEIKEQRHWDISSGERLNILKDFVHFGLEHWGSDTKGVETTRRFLLEWLSYTCRYIPVGLLDVIPQRLNWRPPSYYGRDDLETLMASDSAADWVRLSEMLLGKVPDGFTFSPKHKSNAYDSAENG 699
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa01g4055 699 ProSitePatterns Uncharacterized protein family UPF0034 signature. 431 449 IPR018517 GO:0008033|GO:0017150|GO:0050660
Bisa01g4055 699 MobiDBLite consensus disorder prediction 1 106 - -
Bisa01g4055 699 PANTHER TRNA-DIHYDROURIDINE(47) SYNTHASE [NAD(P)(+)]-LIKE 38 693 - -
Bisa01g4055 699 SUPERFAMILY FMN-linked oxidoreductases 347 660 - -
Bisa01g4055 699 Gene3D Aldolase class I 342 585 IPR013785 -
Bisa01g4055 699 MobiDBLite consensus disorder prediction 223 243 - -
Bisa01g4055 699 Gene3D - 96 173 - -
Bisa01g4055 699 ProSiteProfiles Zinc finger C3H1-type profile. 101 132 IPR000571 GO:0046872
Bisa01g4055 699 MobiDBLite consensus disorder prediction 59 75 - -
Bisa01g4055 699 SMART c3hfinal6 102 131 IPR000571 GO:0046872
Bisa01g4055 699 SMART c3hfinal6 142 169 IPR000571 GO:0046872
Bisa01g4055 699 Pfam Dihydrouridine synthase (Dus) 350 584 IPR035587 -
Bisa01g4055 699 FunFam tRNA-dihydrouridine(47) synthase [NAD(P)(+)] 343 585 - -
Bisa01g4055 699 Coils Coil 82 102 - -
Bisa01g4055 699 MobiDBLite consensus disorder prediction 14 39 - -
Bisa01g4055 699 ProSiteProfiles Zinc finger C3H1-type profile. 145 170 IPR000571 GO:0046872
Bisa01g4055 699 FunFam tRNA-dihydrouridine(47) synthase [NAD(P)(+)] 97 175 - -
Bisa01g4055 699 Pfam Zinc finger C-x8-C-x5-C-x3-H type (and similar) 105 130 IPR000571 GO:0046872
Bisa01g4055 699 Pfam Zinc finger C-x8-C-x5-C-x3-H type (and similar) 145 164 IPR000571 GO:0046872
Bisa01g4055 699 MobiDBLite consensus disorder prediction 223 237 - -
Bisa01g4055 699 CDD DUS_like_FMN 347 582 IPR035587 -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Bisa01g4055 Dus 9.4e-49 CL0036