Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa01g4045 ATGAATCGCCGAAATGTCCCCTACCTCACGGTGTTTCTGGTGTTGCTGGTTGAATTTGGATCGCTGTCCAACACAGGTGTCGCTCACGATTACAGAGACGCATTGTCGAAGGCGATCCTGTTCTTCGAGGGGCAGCGATCGGGATATCTGCCGGACGACCAGCGGATGACGTGGCGGCACCACTCCGGCCTAAGTGACGGGTGGAGCTACGGCGTCGACCTCACCGGCGGCTACTACGACGCCGGCGACAACGTAAAGTTCGGATTTCCGATGGCGTTCACCGCCACAATGCTCGCCTGGAGCGTCATAGAGTTCGGCGACGGAATGCCTCCCAACGAGCGTCGGAATGCGCTTGTGGCTATTCGTTGGGCGACCGATTACTTGCTCAAGGCTCTGTCTCAACCCGATCGGATTTTCGTTCAGGTAGGGGATCCAAACTCAGACCATAACTGTTGGGAGAGGCCAGAAGACATGGACACAGCTAGGACTGTTTATGCCATTGATGCACCCAATCCGGCTTCAGACATCGCCGGTGAGACCGCGGCGGCCCTCGCTGCTTCGTCCATCGCGTTCCGGTCATCAGACCCGGGATATTCGGAGACATTGCTACGATATGCCATCAAAGCCTTTCAGTATGCAGATAACTACAGAGGAGCCTATACAGACAATGCTCATGTTAGGGAAGGCGCATGCCCATATTATTGCAATTATGATGGCTATCAGGACGAACTGTTATGGGGAGCGGCATGGCTTAGAAGGGCCACACAGCACGATGATTACCTAAACTACATTCAAACCAATGCCAAAATCTTTGGAGCCGAAGACAACATCAATGAGTTTGGCTGGGAAAACAAGCATGCTGGCCTCAACGTCCTTGTCTCCAAGGAAGCAATAGAAGGAAGCTTGTACTCCCTAGGATCCTATCGGGCCTCAGCAGAGAGCTTCATATGCACACTCATACCCCAATCATCTTCTTCCCACATCGAATACAGTCCTGGAGGCCTCATTTACAGGCCTGGAGGTAGCAATTTGCAGCACTCCACTTCCGTCTCCTTCCTCCAACTGGTCTACGCCAACTACCTCTCTCGCTCCTCCCAAACCCTAAACTGTGGAACCCTCTCCAACATCACCTCGCAAACCCTCCGAAAACTCGCCAAGAGACAGGTTGATTACATCTTAGGGGATAACCCCATGGGACTCTCCTACATGGTCGGATATGGCAGTAGGTATCCCCAGAGGATCCACCATCGTGGGTCGTCTTTGCCGTCTGTCAAGGACCATCCTCAGGTCATCGCATGCAAGGACGGGACGGTGTACTTCAACTCCTCTGACCCTAACCCTAATGTTCTGGTTGGGGCTGTTGTTGGGGGGCCGGAGGAGGATGATCTGTACGAGGATGATCGAGCTGATTACAGGAAGTCTGAGCCTACAACGTACATTAATGCTCCATTTGTTGGGGTTTTGGCGCACTTTTCTGCCAGTAATTCCGTGGTTTAA 1497 0.5297 MNRRNVPYLTVFLVLLVEFGSLSNTGVAHDYRDALSKAILFFEGQRSGYLPDDQRMTWRHHSGLSDGWSYGVDLTGGYYDAGDNVKFGFPMAFTATMLAWSVIEFGDGMPPNERRNALVAIRWATDYLLKALSQPDRIFVQVGDPNSDHNCWERPEDMDTARTVYAIDAPNPASDIAGETAAALAASSIAFRSSDPGYSETLLRYAIKAFQYADNYRGAYTDNAHVREGACPYYCNYDGYQDELLWGAAWLRRATQHDDYLNYIQTNAKIFGAEDNINEFGWENKHAGLNVLVSKEAIEGSLYSLGSYRASAESFICTLIPQSSSSHIEYSPGGLIYRPGGSNLQHSTSVSFLQLVYANYLSRSSQTLNCGTLSNITSQTLRKLAKRQVDYILGDNPMGLSYMVGYGSRYPQRIHHRGSSLPSVKDHPQVIACKDGTVYFNSSDPNPNVLVGAVVGGPEEDDLYEDDRADYRKSEPTTYINAPFVGVLAHFSASNSVV 498
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa01g4045 498 ProSitePatterns Glycosyl hydrolases family 9 (GH9) active site signature 2. 391 417 IPR018221 -
Bisa01g4045 498 ProSitePatterns Glycosyl hydrolases family 9 (GH9) active site signature 3. 464 482 IPR033126 -
Bisa01g4045 498 PANTHER ENDO-1,4-BETA-GLUCANASE 11 495 - -
Bisa01g4045 498 Gene3D - 27 495 IPR012341 GO:0005975
Bisa01g4045 498 Pfam Glycosyl hydrolase family 9 31 488 IPR001701 GO:0004553|GO:0005975
Bisa01g4045 498 SUPERFAMILY Six-hairpin glycosidases 29 493 IPR008928 GO:0005975
Bisa01g4045 498 FunFam Endoglucanase 27 496 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa01g4045 Bisa-ChrBisa01 97326604 97334993 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa01g4045 1 496 Glycoside Hydrolase AT1G70710 58.468 0.0 599