Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa01g4029 ATGAAGATCCAATGTGATGTGTGTGGGAAAATGGAGGCATCGGTGTTCTGTGGTGCAGACGAAGCAGCTCTGTGCCATGGCTGTGACTGTAGCATCCACCATGCCAACAAGCTCGCCAACCAACACAAACGCTTCTCTCTTCTTCTTCCCACTTCCAAAGATTCCCCTCTCTGTGATATATGTCAAGAGAAGCGAGCATATCTATTTTGCAAAGAAGACAGGGCAATACTATGCAGAGAATGCGACGTCGTTATCCACATAGCCAACGAACACACTCAGAAGCACAACAGGTTTCTTCTCACAGGCGTGAAGCTCTCTTCTTCTTCCTTGGATCCACCTTCTAGCTCCTCCAATGGCGTCGTCGATACCGAACACAACAACAGGGCCGGTACCAATTGCTCTGGAGGAAGAAGAAGATCGTGTTGCGATTCAAACACAAACAGAGTCAGATCGGCCTCGAATGAGAATGAGAATCTGAGTTCTTCTAATTCGATTGTGAATTCCGATGCGATGGTTAGCGACACAGAAGCGGCGTCGACGAGCAGTTTTTCTGAGTACTTGATCGAGACGATACCTGGATTTTTCTTTGAAGACCTTCTCGATGCTTCGTTCCCGCCGAATGGTTTCTGTAAGAATCAGGAGCATTATCCAACATTTCATGATCAAGATCTTCATGTCAGAATGTGTTTATATCCATTAGCAAGAATCTTCGTTACCTGA 720 0.4611 MKIQCDVCGKMEASVFCGADEAALCHGCDCSIHHANKLANQHKRFSLLLPTSKDSPLCDICQEKRAYLFCKEDRAILCRECDVVIHIANEHTQKHNRFLLTGVKLSSSSLDPPSSSSNGVVDTEHNNRAGTNCSGGRRRSCCDSNTNRVRSASNENENLSSSNSIVNSDAMVSDTEAASTSSFSEYLIETIPGFFFEDLLDASFPPNGFCKNQEHYPTFHDQDLHVRMCLYPLARIFVT 239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa01g4029 239 CDD Bbox1_BBX-like 5 47 - -
Bisa01g4029 239 ProSiteProfiles Zinc finger B-box type profile. 1 47 IPR000315 GO:0008270
Bisa01g4029 239 CDD Bbox1_BBX-like 57 100 - -
Bisa01g4029 239 MobiDBLite consensus disorder prediction 108 162 - -
Bisa01g4029 239 Pfam B-box zinc finger 55 92 IPR000315 GO:0008270
Bisa01g4029 239 Gene3D Classic Zinc Finger 1 100 - -
Bisa01g4029 239 ProSiteProfiles Zinc finger B-box type profile. 53 100 IPR000315 GO:0008270
Bisa01g4029 239 FunFam B-box zinc finger protein 21 1 98 - -
Bisa01g4029 239 PANTHER B-BOX ZINC FINGER PROTEIN 22 1 215 - -
Bisa01g4029 239 SMART bboxneu5 4 47 IPR000315 GO:0008270
Bisa01g4029 239 SMART bboxneu5 53 100 IPR000315 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa01g4029 Bisa-ChrBisa01 96990391 96993226 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa01g4029 1 211 C2C2-CO-like Transcription Factor Family AT1G75540 51.163 8.25e-64 200
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Bisa01g4029 zf-B_box 2.1e-08 No_clan