Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa01g3979 ATGGCAAAATCCAACATTACAATTTTAATAGTGTTGTTGTGGCATGGCTTTGCCTTGTTCCACAGTGCTACTGTTAATGCTATACACACGGAGGAGGAACAAGCTTTGCTTCAGCTGCAGACGAAATATTGTGCTGATTTTGTTGACCCAAGCCCATGCTCCTGGGAAGATGGAAGCATTCCCCCAGAAGTCGGCAAGCTTTCTTTTGCTAAGAGCATTGACCTCAATCACAACTCAATCACTGGAAATATACCTTCTCTATCAGGATATTTCACTTCTAAAATTTATTTGGATTTGAGCTACAATAATCTCAATGGAAGTATACCGATAGGATTTGCTGATATGAGCCACATCAATTTATCATACAATTCACTCTCTGGCTTTGTCCCATTTTGTTATTCTCAAGAGTTTGTTATTGGTAATAAGGGAATAATCGGCCCACAAAGGAATCTTAATTGTTCTGACACGTTGCACTCCAAAGTCGATCATCACCTTAATATCATTCTTCCCATCACAAGTATCATTGTCGTCATGCTTGTTGGGGCTTGGCTAGCCTCTCGGTTCATGATCAAGAAAACCAAATTTGTGGAAAGAGAACCTCCAAAGAATGGAGATTTGTTCTCAATATGGAACTTTGATGGTAAAATTGCATATGAAGATATCATTGAAGCAACAGAGGACTTTGATATAAAGTATTGCATTGGAACAGGTGCTTATGGCAGTGTCTATAGAGCACAACTTCCTAATGGCAAAATTGTTGCATTAAAGAAGCTTCACAAAATGGAATCTCAAAACTCAAATTTTGCCAAGAGTTTCAGCATAAAAATGTTGACAGAAATCCGTCATCGGAACATTGTTAAACTTCATGGTTTTTGTCTTCACAAGAAGTGCATGTTTTTGGTATATGAATACATGGAAAAGGGAAGCTTATTTTGTGCATTGAGCAATGACGTAGAAGCTAAAGAATTGAATTGGGAAAAGAGAGTGAGCATCATCAAAGGAATATCACATGCATTGTCTTACATGCATCATGATTGTATCCCAACAATTATTCATCGAGACATAACTACGAGCAATGTCTTGTTGAATGAAAAGATTGAGGCATTTGTATCAGATTTTGGCACAGCAAGGGTTATTGATCCTGATTCCTCTAACCAAACTATATTAGTTGGCACCTACGGATATATCGCCCCAGAATTAGCGTACACATTAACGGTGACTGAAAAATGTGATGTTTATAGTTATGGGGTGGTGGTATTAGAAACAATAATGGGAAGACATCCTGGAGAGCTAGTTTCATCTTTATCAAAGCCAAATCCTCAAAACATAATGCTAAAAGATGTGTTGGACCCTCGCTTACCACCTCCGATCTTGCAAAAAAATGCACAAGATTTGGTTCTTGTAGCCACAATAGCATTGGCATGTCTTCGTCCCCAGCCAAAGGCACGACCATCAATGCAGCGAGTGTGCCAAGAGCTATCAATTTGCAAGCCCCCTTCCCTTTTTCCTTTTAATGATATTTCAATCCAACAATTGATGAATCAAGACATATATGTTGTAGATAAACAGTAA 1572 0.3842 MAKSNITILIVLLWHGFALFHSATVNAIHTEEEQALLQLQTKYCADFVDPSPCSWEDGSIPPEVGKLSFAKSIDLNHNSITGNIPSLSGYFTSKIYLDLSYNNLNGSIPIGFADMSHINLSYNSLSGFVPFCYSQEFVIGNKGIIGPQRNLNCSDTLHSKVDHHLNIILPITSIIVVMLVGAWLASRFMIKKTKFVEREPPKNGDLFSIWNFDGKIAYEDIIEATEDFDIKYCIGTGAYGSVYRAQLPNGKIVALKKLHKMESQNSNFAKSFSIKMLTEIRHRNIVKLHGFCLHKKCMFLVYEYMEKGSLFCALSNDVEAKELNWEKRVSIIKGISHALSYMHHDCIPTIIHRDITTSNVLLNEKIEAFVSDFGTARVIDPDSSNQTILVGTYGYIAPELAYTLTVTEKCDVYSYGVVVLETIMGRHPGELVSSLSKPNPQNIMLKDVLDPRLPPPILQKNAQDLVLVATIALACLRPQPKARPSMQRVCQELSICKPPSLFPFNDISIQQLMNQDIYVVDKQ 523
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa01g3979 523 Gene3D Phosphorylase Kinase; domain 1 194 304 - -
Bisa01g3979 523 FunFam Leucine-rich repeat receptor protein kinase MSP1 191 304 - -
Bisa01g3979 523 SUPERFAMILY Protein kinase-like (PK-like) 207 494 IPR011009 -
Bisa01g3979 523 FunFam MDIS1-interacting receptor like kinase 2 305 499 - -
Bisa01g3979 523 Pfam Protein kinase domain 232 491 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa01g3979 523 Gene3D Ribonuclease Inhibitor 32 156 IPR032675 -
Bisa01g3979 523 ProSitePatterns Protein kinases ATP-binding region signature. 234 256 IPR017441 GO:0005524
Bisa01g3979 523 PANTHER LEUCINE RICH REPEAT KINASE 2 58 497 - -
Bisa01g3979 523 ProSiteProfiles Protein kinase domain profile. 228 501 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa01g3979 523 ProSitePatterns Tyrosine protein kinases specific active-site signature. 350 362 IPR008266 GO:0004672|GO:0006468
Bisa01g3979 523 SUPERFAMILY L domain-like 59 130 - -
Bisa01g3979 523 Gene3D Transferase(Phosphotransferase) domain 1 305 500 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa01g3979 Bisa-ChrBisa01 95724993 95727938 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa01g3979 57 398 Receptor kinase-like Gene Family AT4G08850 44.658 2.58e-87 288
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Bisa01g3979 Pkinase 6.9e-44 CL0016