Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa01g3978 ATGCCGCGACCGGAAAAGAGCCAGAAAGAAAACGCTGGTCAATCACGACCCAGAAAGAATCCGTTGCAGAGAACCAGAAAAGGCCACGAACACCACCGCGACGGAAATAGAAGAACTCGCAACGGAATCCAACCAGGGGGTGATCTGCTCCTCCTACACCATATCTACTTTGAAATGGAACAAGAGAGGACGATGTACGAGAGGACGGTGAGGCAGAGAAGAGAGGTCAAAGGCGAGAGAAGAGAGCTGGACAACGACGACGGCGAGAATGGCAGTCGAGAACGCAGACGCAGCAGACGGCGGGAAGAGAGACGCAGCAGACGGCAGGAAGAGAGACGCAGCAGCCGGTGGGCGATTGAGAAGAGAGACGCAGCACGGGCGGCAGCAGACGGCGCGCGTTGGGCGAGAAGACAGACCAGAGAAGAGACTCAAAAATTGCCACCTGGAAAACTGCGGATGGCAGCATCCAGCATTTGTATTACAATTTTAGTAGTATTGTTGTGGCATGGCTCTGCCTTGTTCCACAGTGCTACTGTTAATGCTATACACACGGAGGAGGAACAAGCTTTGCTTCAGCTACAGGCGGAATATTGTGCTAGTTTCGTTGACCCAAACCCATGCTCTTGGGAAGAATTAGCGTACACATTAATGGTGACTGAAAAATGTGATGTTTATAGTTATGGGGTGGTGGTATTAGAAACAATAATGGGAAGACATCCTGGAGAGCTAGTTTCATCTTTATCAAAGCCAAATCCTCAAAACATAATGCTAAAAGATGTGTTGGACCCTCGCTTACCACCTCCCGTCTTGCAAAAACATGCACAAGATGTGGTTCTTGTAGCCACAATAGCGTTGGCATGTATTCGTCCCCAGCCAAAAGCACGACCATCAATGCAGCAAGTGTGCCAAGAGCTATCAATTTGCAAGCCCCCTTCCCTTTTTCCTTTTAGTGATATTTCAATCCAACAATTGATGAATCAAGACATAGTTGTAGATAAACAGTAA 1005 0.4836 MPRPEKSQKENAGQSRPRKNPLQRTRKGHEHHRDGNRRTRNGIQPGGDLLLLHHIYFEMEQERTMYERTVRQRREVKGERRELDNDDGENGSRERRRSRRREERRSRRQEERRSSRWAIEKRDAARAAADGARWARRQTREETQKLPPGKLRMAASSICITILVVLLWHGSALFHSATVNAIHTEEEQALLQLQAEYCASFVDPNPCSWEELAYTLMVTEKCDVYSYGVVVLETIMGRHPGELVSSLSKPNPQNIMLKDVLDPRLPPPVLQKHAQDVVLVATIALACIRPQPKARPSMQQVCQELSICKPPSLFPFSDISIQQLMNQDIVVDKQ 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa01g3978 334 Pfam Protein tyrosine and serine/threonine kinase 211 305 IPR001245 GO:0004672|GO:0006468
Bisa01g3978 334 MobiDBLite consensus disorder prediction 104 147 - -
Bisa01g3978 334 SUPERFAMILY Protein kinase-like (PK-like) 211 315 IPR011009 -
Bisa01g3978 334 Coils Coil 66 86 - -
Bisa01g3978 334 PANTHER LEUCINE RICH REPEAT KINASE 2 197 309 - -
Bisa01g3978 334 Gene3D Transferase(Phosphotransferase) domain 1 171 311 - -
Bisa01g3978 334 MobiDBLite consensus disorder prediction 73 97 - -
Bisa01g3978 334 MobiDBLite consensus disorder prediction 20 34 - -
Bisa01g3978 334 MobiDBLite consensus disorder prediction 1 46 - -
Bisa01g3978 334 MobiDBLite consensus disorder prediction 73 148 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa01g3978 Bisa-ChrBisa01 95693462 95699898 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa01g3978 211 318 Receptor kinase-like Gene Family AT5G65700 38.655 6.89e-13 67.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Bisa01g3978 PK_Tyr_Ser-Thr 2e-05 CL0016