Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa01g3968 ATGTTGCGCTGTCTGAACGGTTCGGAGAATCTGGCTGGGACCTGTTCGGAGATGACGGTATTGGAGATGCAAAGAGACAGGATGAAATGGCAGCAAAATCAACAGCAACAACAAGAGCAAGGACAGCATCATCAGAATCATCATCTTCTCCATCAGAACCAGAGCTACTTTTGTGGAAGTGGCTTCGACGGTGGGTTCTCGTCGCTGCAAGTTCAGAATTCTCCGGCGTTGATGATGATGATGATGACGACGAATGGCGCCGCCGAATGTGCGCTCGACGAGGTGGTTGCTAATGCTAATGCTCGGTCGGTGAAGCCCGACTCGGGGTTGGAAAACGGGTGGCCCGATTTGGGGAAGCTCGAGATGCCCAAGTTAGGGTTCGTGTCTTCTGGCTTTGATGTCGCAAGCTCTGCAATCTCAAGAACATCTAGCTGCCCGCCGACCCCACTTTCCGACGGTCAAGGCAAAGACTCAGTTTCTATGGCGGCGGAGATGATGAGATCGCCGAGCTTCAAGAAGAGGAAATCTGACAAAATTCAGAACCCCAAGGTTATTGCACAGAATGAGAACAGCAACAAAAGGAACAAAGCAAGTGCTGAAGAAGGAGAATCTAAAATTACAACAAATAATGACAAAAACAAGAACAAGAACAACGACAAGAACAGAGAAACATCTCCAGATTCCTCGAAGGAGAATTCGAAGACGTCTGAGGCCCAAAATCCAAAGCCTGACTACATTCATGTCCGAGCTCGGCGTGGTCAAGCCACCGATAGCCATAGCTTAGCTGAAAGAGTTAGGAGGGAGAAAATTAGCGAGAGAATGAAGTATTTGCAGGATTTAGTGCCTGGTTGTAACAAAATCACAGGGAAAGCTGGCATGCTTGATGAAATCATCAACTACGTTCAGTCTCTTCAACGTCAAGTAGAGTTCTTGTCAATGAAACTAGCTGCTGTGAACCCAAGGGTAGACTTCAACGTCGATGATCTGATTCCCAAAGATGTATTTGCTGCCTGTGGTGCTTCGAGTTTTGGAGGCATGGAGATGACTAGCAACATCCATGGCTATGTTCAGTTTGGTTCAGGTTCAGCAGAAATGGAAATGGGGGGGATAAACCCTCCCGATGTGGGACTTCGAAGGACCATTAGTGCCCCCGGCTCTATGCCACACGAAACGTTTCTTGACTCATCCTGCTTCGCTCAAATTCTACCATTTTCAACTTGCGAAGCTGATTTGCAGAACCTTTACAATGTGGGTTTTGATGAAGCAAGATCAATTTCAACAACGTCCTTTCCTTCTCAGCCATTCGGAACAGGTTCAGGTGTAATTGAAGGTAGCAATCTAAAGATGGAGATGTGA 1356 0.472 MLRCLNGSENLAGTCSEMTVLEMQRDRMKWQQNQQQQQEQGQHHQNHHLLHQNQSYFCGSGFDGGFSSLQVQNSPALMMMMMTTNGAAECALDEVVANANARSVKPDSGLENGWPDLGKLEMPKLGFVSSGFDVASSAISRTSSCPPTPLSDGQGKDSVSMAAEMMRSPSFKKRKSDKIQNPKVIAQNENSNKRNKASAEEGESKITTNNDKNKNKNNDKNRETSPDSSKENSKTSEAQNPKPDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVEFLSMKLAAVNPRVDFNVDDLIPKDVFAACGASSFGGMEMTSNIHGYVQFGSGSAEMEMGGINPPDVGLRRTISAPGSMPHETFLDSSCFAQILPFSTCEADLQNLYNVGFDEARSISTTSFPSQPFGTGSGVIEGSNLKMEM 451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa01g3968 451 MobiDBLite consensus disorder prediction 194 230 - -
Bisa01g3968 451 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 252 323 IPR036638 GO:0046983
Bisa01g3968 451 Pfam Helix-loop-helix DNA-binding domain 258 305 IPR011598 GO:0046983
Bisa01g3968 451 MobiDBLite consensus disorder prediction 244 262 - -
Bisa01g3968 451 MobiDBLite consensus disorder prediction 138 155 - -
Bisa01g3968 451 Coils Coil 20 40 - -
Bisa01g3968 451 SMART finulus 260 310 IPR011598 GO:0046983
Bisa01g3968 451 CDD bHLH_AtBPE_like 244 329 - -
Bisa01g3968 451 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 162 353 IPR024097 GO:0006355
Bisa01g3968 451 FunFam Basic helix-loop-helix transcription factor 251 323 - -
Bisa01g3968 451 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 254 304 IPR011598 GO:0046983
Bisa01g3968 451 MobiDBLite consensus disorder prediction 138 262 - -
Bisa01g3968 451 Gene3D - 251 324 IPR036638 GO:0046983
Bisa01g3968 451 MobiDBLite consensus disorder prediction 26 46 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa01g3968 Bisa-ChrBisa01 95544104 95546932 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa01g3968 131 329 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G18300 51.961 4.38e-56 188
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Bisa01g3968 HLH 2.6e-06 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa01g3968 01 95544104 95546932 Bisa01g3968 01 95544104 95546932 ECH
Bisa01g3968 01 95544104 95546932 Bisa11g1659 11 37808906 37811415 ECH