Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa01g3966 ATGGCCTCAAGCTCTCTAAGCAAACAGAAGCTCTCTGAGTCCTCCTGGACACCAAAACAGAACAAGATGTTTGAGAAGGCACTTGCAAAATATGATAAGGACACTCCTGATCGCTGGCAGAATGTGGCCAGAGCAGTTGGTGGAAAATCGGCTGAGGAAGTTAAGAGACACTATGAAATCCTCCTAGAGGATCTCAGACACATAGAGTCTGGTCGTGTTCCCATCCCCAACTACAAATCCACAGGTAGCAGCAGCAATGTTGATGAAGAAGAGAGGCTTCTGAAGTATCTTAAGCTGAATTGA 303 0.4587 MASSSLSKQKLSESSWTPKQNKMFEKALAKYDKDTPDRWQNVARAVGGKSAEEVKRHYEILLEDLRHIESGRVPIPNYKSTGSSSNVDEEERLLKYLKLN 100
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa01g3966 100 SMART sant 12 64 IPR001005 -
Bisa01g3966 100 FunFam Transcription factor SRM1 8 75 - -
Bisa01g3966 100 CDD SANT 15 62 IPR001005 -
Bisa01g3966 100 Gene3D - 7 75 - -
Bisa01g3966 100 SUPERFAMILY Homeodomain-like 14 70 IPR009057 -
Bisa01g3966 100 ProSiteProfiles SANT domain profile. 11 66 IPR017884 -
Bisa01g3966 100 ProSiteProfiles Myb-like domain profile. 8 62 IPR001005 -
Bisa01g3966 100 PANTHER MYB FAMILY TRANSCRIPTION FACTOR-RELATED 1 87 IPR044636 GO:0003700
Bisa01g3966 100 Pfam Myb-like DNA-binding domain 14 58 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa01g3966 Bisa-ChrBisa01 95496005 95496922 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Bisa01g3966 Myb_DNA-binding 6.2e-07 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa01g3966 01 95496005 95496922 Bisa01g3966 01 95496005 95496922 ECH
Bisa01g3966 01 95496005 95496922 Bisa11g1695 11 38305876 38306880 ECH
Bisa11g1695 11 38305876 38306880 Bisa01g3966 01 95496005 95496922 ECH