Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa01g3960 ATGGTGGATCGGCGAAGCATAGTGTCTCTTGGTTTCTTGTTCTCGTTGCTGTTTCAGTTCACATTTGAACAGATTGTGCCTCTGAGTTCACCCACAGAGCGAGCTGCACTCTTTGACCTCAGATCGTCTCTGGGCTTGAGGAGCAAGGAATGGCCTCGAAAGGCCGACCCTTGCTCTCTCTGGAACGGTATCACCTGCGAGAATGGACGAGTCATTGGGATCAATATTTCTGGGTTTAGAAGAACCCGACTTGGGAGGCAAAACCCACAATTCGCAGTCGATGCTTTGACCAATTTGACCCTCTTGCAGTCCTTCAATGCCTCCAATTTTCTGCTTCCTGGTCTTATTCCTGACTGGTTTGGCCTACAGCTCTCTTCTTTGCAAGTCCTTGATCTTCGGTCTTGTTCTGTCAATGGCGCTATTCCTTCCAGTCTAGGGAATTTAACCAACCTCACTAGTCTGTATTTATCTCATAATAATCTTACTGGGACAATTCCTAATAGTCTGGGTCAACTGCTGAGCCTTTCAGTTTTTAACATTTCCCGAAATTTACTTACTGGGTTCATTCCAACATCGATTGCCTTGCTTGGGAATCTTTCTTCTCTTGACATTTCCAACAATTTTTTGTCTGGCTCGATTCCTTTGGGCATTGGGGCCCTCACAAGGTTACAGTACTTGAATCTTTCCAGTAACAGTCTAACGGCTTCTATACCGTCGCAGCTGGGGAATCTTAGTAGCTTGGTCGACCTTGATCTTAGTGTTAATTCTCTATCTGGTGTGGTGCCTCCTGAGTTAAGAGGGCTGAGGAGCTTGCAGAGAATCATACTAGGGAACAACATGCTTAGTGGACCGTTGCCGCAGAACTTATTTCCTACTCCATCGCAGTCACAGTTGCAGTTCATAGTGCTGAGACAAAACAATTTTACTGGTGCCTTGCCTGATGTGTTGTGGTCTCTGCCGAGATTGAGCTTCCTCGACCTCTCTGGCAATAACTTCACCGGTGTGCTTCCAAATTCTAGTTCCAGTCCTAATGCTACTGCTGCTGAGCTTGATATATCTAATAATATGTTTTATGGAAGCCTTAGTCCTCTTCTCAGAAGGTTCAGTTTCATTGATCTGTCAAGCAATTATTTTGAGGGCAGGGTTCTGGATTTCATGCTCAATGTATCTCTAAATACCAACTGCCTCCAAAACGTTTCTAATCAGAGGACTACAGAAGAATGTGCATCATTTTATGCTGAGAGGGGCCTCACTTTTGATAATTTTGGACGCCCAAATTCAACAGGACCTCCTGCGGCGGAAAGCTCTGGGAACAGCAATAGAAAAAAGATTATATTGGCAGCAGTCTTGGGTGGAGTTGGTTTAGCTGTGATTTTATCGTTTCTCCTGGTGTTGTTCCTTCTTTGTACTCGTAAGAGGGGTAATTCGAATCAAAGAGGAAACGGTGTGGGCCCTGCTCCTGCTGGAAGCAGTCCTCCGCCTCCTGGTGTATCAATCAATCTTATAAATGTAGGAGATTCATTTACAATTGAGCAGTTACTTCAGGCCACAGGTGATTTTAGCGATGCAAATCTTATCAAGCACGGCCACTCCGGGGATCTTTTCAACGGTGTTTTGGAAAGTGGTATCCCTGTGGTCATTAAGAGGATTGATGTGCATTCGACTAAAAAGGATTCTTATTTAGTGGAATTGGACTTCTTCAGTAAGATTTCTCATACAAGATTCGTTCCTCTGCTGGGTCATTGCTTAGAAAATGAGAATGAGAAGTTCCTGGTTTATAAACATATGCCTAATGGGGACTTGTCGAATAGCTTGTACTACAAAAAAACTACATCTGAAGATGGTACTTTGCAGTCATTGGACTGGATAACAAGGTTGAAAATTGCTATTGGAGCAGCAGAGGCCCTATCTTATCTGCATCATGAGTGGAATCCACCCTTTGTTCATAGAGATGTTCAAGCAAGCAGTATACTACTGGATGACAAATATGAAGTTCGGTTAGGGAGTCTAAGTGAAGTTTGTACTCAAGAAGGAGATAGTCATCAAAGCAAAATTACCAGGCTACTAAGGTTGCCCCAGTCCTCTGACCCAGGCACATCTGGTTCATCGACTTCAATTTGTGCCTATGACGTTTATTGCTTTGGTAAAGTATTGCTTGAGTTGGTGACGGGTAAGATGGGAATTAGTGCATCCAGTGATGCTGAATTGAAGGAATTGTTGGAACAGACGCTACCATACATTAGTATTTTTGACAAGGAGCTTGTAGCCAAAATCGTGGATCCCTCTCTGGTTGTCGATGAGGATTTCTTAGAGGAAGTGTGGGCTATTGCCATTGTTGCGAGGTCTTGCCTAAATCCCAAACCTTCAAGGCGACCCCCAATGAGATATGTTCTCAAGGCTTTAGAAAACCCTTTAAAAGTTGTAAGGGAAGAAAGCGCTGGTTCTTCACGACTTAGAGCAACCTCTTCTAGAGGCTCTTGGAATGCTGCTTTATTTGGTAGTTGGCGTCAGAGTTCATCTGATGTAACCGTAATCCCAGCAACCTCAGGTACAAAAGTAGAAGGAGGGAGTAGTTTAAAGCATTCGGGAACTACTGGCTCACAGGGCAGCTACCATAATGGTAATAATTCATCATCCCGTAGGCGACACTCAAAGGAAATATGTCCAGAACCATCTAACGTTCAAGATGTAGAGAGGCCAGAGCAGGACTAG 2712 0.441 MVDRRSIVSLGFLFSLLFQFTFEQIVPLSSPTERAALFDLRSSLGLRSKEWPRKADPCSLWNGITCENGRVIGINISGFRRTRLGRQNPQFAVDALTNLTLLQSFNASNFLLPGLIPDWFGLQLSSLQVLDLRSCSVNGAIPSSLGNLTNLTSLYLSHNNLTGTIPNSLGQLLSLSVFNISRNLLTGFIPTSIALLGNLSSLDISNNFLSGSIPLGIGALTRLQYLNLSSNSLTASIPSQLGNLSSLVDLDLSVNSLSGVVPPELRGLRSLQRIILGNNMLSGPLPQNLFPTPSQSQLQFIVLRQNNFTGALPDVLWSLPRLSFLDLSGNNFTGVLPNSSSSPNATAAELDISNNMFYGSLSPLLRRFSFIDLSSNYFEGRVLDFMLNVSLNTNCLQNVSNQRTTEECASFYAERGLTFDNFGRPNSTGPPAAESSGNSNRKKIILAAVLGGVGLAVILSFLLVLFLLCTRKRGNSNQRGNGVGPAPAGSSPPPPGVSINLINVGDSFTIEQLLQATGDFSDANLIKHGHSGDLFNGVLESGIPVVIKRIDVHSTKKDSYLVELDFFSKISHTRFVPLLGHCLENENEKFLVYKHMPNGDLSNSLYYKKTTSEDGTLQSLDWITRLKIAIGAAEALSYLHHEWNPPFVHRDVQASSILLDDKYEVRLGSLSEVCTQEGDSHQSKITRLLRLPQSSDPGTSGSSTSICAYDVYCFGKVLLELVTGKMGISASSDAELKELLEQTLPYISIFDKELVAKIVDPSLVVDEDFLEEVWAIAIVARSCLNPKPSRRPPMRYVLKALENPLKVVREESAGSSRLRATSSRGSWNAALFGSWRQSSSDVTVIPATSGTKVEGGSSLKHSGTTGSQGSYHNGNNSSSRRRHSKEICPEPSNVQDVERPEQD 903
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa01g3960 903 FunFam Probable LRR receptor-like serine/threonine-protein kinase At2g16250 294 424 - -
Bisa01g3960 903 SUPERFAMILY Protein kinase-like (PK-like) 496 801 IPR011009 -
Bisa01g3960 903 Gene3D Transferase(Phosphotransferase) domain 1 596 819 - -
Bisa01g3960 903 PRINTS Leucine-rich repeat signature 199 212 - -
Bisa01g3960 903 PRINTS Leucine-rich repeat signature 220 233 - -
Bisa01g3960 903 MobiDBLite consensus disorder prediction 847 877 - -
Bisa01g3960 903 FunFam Leucine-rich repeat receptor protein kinase EMS1 190 288 - -
Bisa01g3960 903 SUPERFAMILY L domain-like 92 419 - -
Bisa01g3960 903 ProSiteProfiles Protein kinase domain profile. 520 806 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa01g3960 903 FunFam Putative LRR receptor-like serine/threonine-protein kinase 596 821 - -
Bisa01g3960 903 FunFam Predicted protein 490 595 - -
Bisa01g3960 903 Gene3D Ribonuclease Inhibitor 293 408 IPR032675 -
Bisa01g3960 903 Gene3D Ribonuclease Inhibitor 190 292 IPR032675 -
Bisa01g3960 903 Gene3D Phosphorylase Kinase; domain 1 499 595 - -
Bisa01g3960 903 FunFam Probable LRR receptor-like serine/threonine-protein kinase At2g16250 30 189 - -
Bisa01g3960 903 MobiDBLite consensus disorder prediction 847 903 - -
Bisa01g3960 903 SMART LRR_typ_2 148 172 IPR003591 -
Bisa01g3960 903 SMART LRR_typ_2 220 244 IPR003591 -
Bisa01g3960 903 SMART LRR_typ_2 319 342 IPR003591 -
Bisa01g3960 903 SMART LRR_typ_2 268 292 IPR003591 -
Bisa01g3960 903 SMART LRR_typ_2 196 219 IPR003591 -
Bisa01g3960 903 Gene3D Ribonuclease Inhibitor 32 189 IPR032675 -
Bisa01g3960 903 Pfam Leucine rich repeat 222 281 IPR001611 GO:0005515
Bisa01g3960 903 Pfam Leucine rich repeat 149 207 IPR001611 GO:0005515
Bisa01g3960 903 ProSiteProfiles Leucine-rich repeat profile. 150 172 IPR001611 GO:0005515
Bisa01g3960 903 MobiDBLite consensus disorder prediction 476 496 - -
Bisa01g3960 903 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 175 802 - -
Bisa01g3960 903 Pfam Protein tyrosine and serine/threonine kinase 526 759 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa01g3960 Bisa-ChrBisa01 95356995 95362548 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa01g3960 32 693 Miscellaneous Gene Families AT2G16250 59.281 0.0 756
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XIV Bisa01g3960 PK_Tyr_Ser-Thr 1.8e-19 CL0016