Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa01g3957 ATGTCGGCGGTCTCCGACGTCTCCTACAGTAATGCTCTGCATGAGCTCACTCACAGGACTCATTTTCTCGGCTTAAAGCTTTACATCCTCATCTGCGGATTCCTTTCGATCCTGGTGGTTCTAGTGCTTCTGATCTTCCTCTGCATTCGCAGGAATCGGAGCTCGACGATTTTGAAGCCCAAAATTCTAGCTAAGCTCAGCTCCGGCGCAATTCCGCTGGTCTCAAAGGAGATCGTCGAGGTCAGAGACTTGGATCTTGATCTCGTTAGAATCGAAGGTGAGCGGAGAGAGGTTGAGATTGGAGATAGCGATTTAAGGAAAGATGTGGAAGCGGAGGGGATCAAGGTCGAAGGAAGAGGAAGAGGAAGAAGAAAAAGGAGCGAAGAGAATGATGACGTGGCGGTCGTGAAGTCTCCGAATATAGGGTGGGGCCGTTGGTATAGCTTGGAGGAGCTTAGGATCGCGACACGTGGCTTCGCCGATGAGAATGTGATCGGAGAAGGAGGTTATGGGATTGTGTACAGAGGAGTTCTTCAGGATGGCTCTGTGGTTGCTGTGAAGAATCTTCTAAACAACAAGGGTCAAGCCGAGAAGGAGTTTAAGGTGGAGGTCGAAGCCATTGGAAAAGTAAAACATAAAAATTTGGTGGGTTTAGTCGGATATTGTGCAGAAGGTTCTCAAAGGATTCTCGTTTATGAATATGTTGACAATGGAAACTTGGAGCAGTGGTTGCATGGTGAAGTAGGTCCTATTAGCCCATTGACTTGGGATATACGAATGCGGATCGCCATTGGAACAGCAAAAGGGCTAGCCTATTTGCATGAAGGATTAGAACCCAAAGTTGTGCACCGAGATGTGAAATCCAGTAACATTCTTCTGGACAAAAGATGGAATGCCAAAGTATCAGACTTTGGACTGGCAAAGCTCTTAGGATCTGAGAAGAGCTATGTTTCTACACGTGTAATGGGAACATTTGGATATGTTTCGCCTGAGTATGCAAGCACAGGCATGCTTAATGAAGGCAGTGATGTGTATAGCTTTGGAATTCTACTCATGGAGATAATCACCGGACGAAGCCCCATTGACTATTCTAGACCCTCAGGAGAGATGAATTTGGTTGATTGGTTCAAGGGAATGGTAGCAAGTCGTCGTGGAGATGAGCTAGTAGACCCTTTGATTGTGGTTCAGCCCTCTCCGAGACCTTTGAAGCGAGCTTTGCTGGTTTGTCTGCGTTGCATTGATATGGATGTCAGTAAGCGACCAAAGATGAGTCAAATTGTTCATATGCTTGAGGCAGATGATTTCCCCTTTCGTTCTGAACTTCGTACAAATAAAGAGAAAGATCCTGTTCCTTATGCTGCATCTGTTTCCAGTAAAATTCCATATCCTCCAAAGCACATTGAGTCAGTAGAAAGATCAAGATGGAGATGA 1431 0.4584 MSAVSDVSYSNALHELTHRTHFLGLKLYILICGFLSILVVLVLLIFLCIRRNRSSTILKPKILAKLSSGAIPLVSKEIVEVRDLDLDLVRIEGERREVEIGDSDLRKDVEAEGIKVEGRGRGRRKRSEENDDVAVVKSPNIGWGRWYSLEELRIATRGFADENVIGEGGYGIVYRGVLQDGSVVAVKNLLNNKGQAEKEFKVEVEAIGKVKHKNLVGLVGYCAEGSQRILVYEYVDNGNLEQWLHGEVGPISPLTWDIRMRIAIGTAKGLAYLHEGLEPKVVHRDVKSSNILLDKRWNAKVSDFGLAKLLGSEKSYVSTRVMGTFGYVSPEYASTGMLNEGSDVYSFGILLMEIITGRSPIDYSRPSGEMNLVDWFKGMVASRRGDELVDPLIVVQPSPRPLKRALLVCLRCIDMDVSKRPKMSQIVHMLEADDFPFRSELRTNKEKDPVPYAASVSSKIPYPPKHIESVERSRWR 476
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa01g3957 476 SMART serkin_6 159 437 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa01g3957 476 CDD STKc_IRAK 165 431 - -
Bisa01g3957 476 ProSitePatterns Protein kinases ATP-binding region signature. 165 187 IPR017441 GO:0005524
Bisa01g3957 476 Gene3D Transferase(Phosphotransferase) domain 1 235 445 - -
Bisa01g3957 476 ProSitePatterns Serine/Threonine protein kinases active-site signature. 281 293 IPR008271 GO:0004672|GO:0006468
Bisa01g3957 476 PANTHER OS01G0323000 PROTEIN 14 447 - -
Bisa01g3957 476 SUPERFAMILY Protein kinase-like (PK-like) 141 431 IPR011009 -
Bisa01g3957 476 MobiDBLite consensus disorder prediction 448 476 - -
Bisa01g3957 476 FunFam Probable serine/threonine-protein kinase At1g01540 139 234 - -
Bisa01g3957 476 ProSiteProfiles Protein kinase domain profile. 159 423 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa01g3957 476 Gene3D Phosphorylase Kinase; domain 1 117 234 - -
Bisa01g3957 476 FunFam Putative receptor-like serine/threonine-protein kinase 235 445 - -
Bisa01g3957 476 Pfam Protein kinase domain 160 428 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa01g3957 Bisa-ChrBisa01 95309236 95314005 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa01g3957 119 433 Trihelix Transcription Factor Family AT1G70460 48.903 2.25e-93 296
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-V Bisa01g3957 Pkinase 3.7e-46 CL0016