Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa01g3941 ATGGCCTCTCCAGATTCATCTCCATCTTCCTCAAACTCGTCACCACCACCACCGATGTCTTCGCCGCCGCAATCACCACCACCACCAGATCAATCGCCACCTCCTGCATCGCCTCCACCACCACCACCAAATCAATCACCACCTCCTGCATCGCCTCCCCCGCTACCATCAGACCAATCACCACCTCTTGCATCACCTCCACCAACACCCTCGGATCAATCACCGCCTCCTGCGTCGCCTCCACCGCCACCATCAGATCAATCACCACCTCCTGCGTCGCCTCCACCGCCATCATCAGATCAATCACCACCTTTTGCATCGCCTCCTCCACCACCACCACCTTCCGAAAATGGTGATGGCAATAGATCGTCCAACCCACTATCACCGCTGCCCCAGTCACCAGACGCGCCGTCCCAAACAATTAACCCAGGGTTTTCACCTCCACCTAAACATCATAAATGGGTTGCTCCACCACTACCCGATCCAACCCTTGTGTCATCAAATTTACCATCCGCAAGGGGTAAAGGAGACCAATTGACTACAACAATAATTGGAATTGCAGCTGCAGCTGCAGCTGGAGTATTGCTGATTATCGTTATAATAATCATGATTTTAAATTCAAGAAGGAAGAAGAGATCAAATGTTGGCCCATATTACTACAATAATTATCATGCTGATGGCTATTACGAGCGAGCACCATATCCAAATCATCAACAACAAGTGGGTGGTGGGTTCAAAAACAATCACGGTGAACAAATTCCAAGTGTAACTCCACCCATGGCCAAGGGTCAAAAGCCTTGGATCACACCACCCTCATCCCCAACCCCCCAGGTGTATAGCTGTGAGATAAGCAACTTTAGTTCTGGCCCTCAAGGTAGCCCATTGCCACCCCCACACCCTGTAGTGGCCCTTGGATTCCACAAGAGCAACTTCACAATGGATGAGCTATCAGCTGCCACTGGTGAGTTTTCACAAGCTAACCTAATAGGTCAAGGCGGGTTTGGCTATGTACACAAAGGTGTGTTCCCCAGTGGTAAGGAGATAGCAGTGAAGACCCTTAAATCTGTGGGAGGGCAAGGAGACAAAGAATTCCAAGCTGAGATTGAGGTTATCAATCGGGTGCATCATCGCCATCTTGTATCACTTGTTGGGTATTGCATTTCAGAGGGCAAAAGCCTATTGGTGTATGAATTTGTGCCTAACAAAACCTTGGAATACCACCTTCATGGTAACCCTCGTATTATTCACCGAGACATAAAGGGTGCAAACATTCTCATCGATGACAACTTTGAAGCCAAGGTGGCAGATTTTGGATTGGCGAGGTTTAATCAAGACAACAACACTCATGTTTCTACTCGTGTAATGGGCACATTTGGGTATATGGCTCCTGAGTATGCATCAAGTGGTAAGCTGACTGAAAAATCTGATGTCTTCTCGTATGGTGTCGTGCTTCTGGAGCTAATAACAGGACGACCTCCTATAGACCTAACTGGTGATTTTGAAGAGGACTGTTTAGTTGAATGGGCTAGACCTCTTTGTACAAAGGCATTGGAAAGCGGAAACTATGAAGGACTGGTGGACCCACGATTAGAGAACAGTTATGAAAAGCAAGAGATGGCACGCATGGTGGCTTGTGCTGCTGCTAGTGTTAGGCACTCGGGAAGGAAGAGACCAAAAATGAGCCAGATTGTGCGAGCTCTGGAAGGTAATATCTCACTGGATGCCCTGAATGAAGGGGTGGGACCTGGCCAAAGTTCAATATTTAGCAATAATAATTGTGAATATGATTCTGGCGCATACAAAGCTGACATAAGTAGGTTTAGAAAGCTAGCACTTGAGAGCGGCATTGCAAGCAGCGACTCTGGTGGGACAAGTGAGTTTGAGAATGATGCTTCCATTTCAAGTCAAGACATGGCAGAAAGACACAATTAA 1932 0.4762 MASPDSSPSSSNSSPPPPMSSPPQSPPPPDQSPPPASPPPPPPNQSPPPASPPPLPSDQSPPLASPPPTPSDQSPPPASPPPPPSDQSPPPASPPPPSSDQSPPFASPPPPPPPSENGDGNRSSNPLSPLPQSPDAPSQTINPGFSPPPKHHKWVAPPLPDPTLVSSNLPSARGKGDQLTTTIIGIAAAAAAGVLLIIVIIIMILNSRRKKRSNVGPYYYNNYHADGYYERAPYPNHQQQVGGGFKNNHGEQIPSVTPPMAKGQKPWITPPSSPTPQVYSCEISNFSSGPQGSPLPPPHPVVALGFHKSNFTMDELSAATGEFSQANLIGQGGFGYVHKGVFPSGKEIAVKTLKSVGGQGDKEFQAEIEVINRVHHRHLVSLVGYCISEGKSLLVYEFVPNKTLEYHLHGNPRIIHRDIKGANILIDDNFEAKVADFGLARFNQDNNTHVSTRVMGTFGYMAPEYASSGKLTEKSDVFSYGVVLLELITGRPPIDLTGDFEEDCLVEWARPLCTKALESGNYEGLVDPRLENSYEKQEMARMVACAAASVRHSGRKRPKMSQIVRALEGNISLDALNEGVGPGQSSIFSNNNCEYDSGAYKADISRFRKLALESGIASSDSGGTSEFENDASISSQDMAERHN 643
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa01g3941 643 ProSitePatterns Serine/Threonine protein kinases active-site signature. 414 426 IPR008271 GO:0004672|GO:0006468
Bisa01g3941 643 Gene3D Phosphorylase Kinase; domain 1 299 398 - -
Bisa01g3941 643 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 299 398 - -
Bisa01g3941 643 MobiDBLite consensus disorder prediction 616 643 - -
Bisa01g3941 643 ProSitePatterns Protein kinases ATP-binding region signature. 329 351 IPR017441 GO:0005524
Bisa01g3941 643 MobiDBLite consensus disorder prediction 1 159 - -
Bisa01g3941 643 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 411 610 IPR047117 -
Bisa01g3941 643 ProSiteProfiles Protein kinase domain profile. 323 573 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa01g3941 643 FunFam proline-rich receptor-like protein kinase PERK8 401 582 - -
Bisa01g3941 643 MobiDBLite consensus disorder prediction 617 634 - -
Bisa01g3941 643 SMART serkin_6 323 530 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa01g3941 643 Pfam Protein kinase domain 407 495 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa01g3941 643 MobiDBLite consensus disorder prediction 118 140 - -
Bisa01g3941 643 Gene3D Transferase(Phosphotransferase) domain 1 402 577 - -
Bisa01g3941 643 PRINTS Proline rich extensin signature 41 57 - -
Bisa01g3941 643 PRINTS Proline rich extensin signature 6 18 - -
Bisa01g3941 643 PRINTS Proline rich extensin signature 18 39 - -
Bisa01g3941 643 PRINTS Proline rich extensin signature 58 75 - -
Bisa01g3941 643 MobiDBLite consensus disorder prediction 10 117 - -
Bisa01g3941 643 SUPERFAMILY Protein kinase-like (PK-like) 310 566 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa01g3941 Bisa-ChrBisa01 94997001 95002705 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa01g3941 182 627 Trihelix Transcription Factor Family AT1G70460 43.701 4.26e-125 384
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-1 Bisa01g3941 Pkinase 7.4e-25 CL0016