Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa01g3900 ATGGGGGGTTGTACCTCCAAGCCGTACAAGCCGAACCCATATTCCGTTAGGCAAACGGAAGACGGCCACGATCCGTACGACTCTTCACAAATGCCGAAAGCCCCTCACACTCCCATCCCCAACAACTACCACAACCACCGGAAAGATGACGTCATTTCGGGGAAGCAATCGCCGTTCTTCCCCTCTTACAGTCCCAGCCCAGCTCACTTCCTCAAGAAATCTCCGGCGAACAAGAGTGCGACCTCGATGCCGAGGAGGTTTTTCCTGCGGCCCTTCCCTCCGCTGTCTCCGGCCAAACACATAAGGGCTGTGCTGGCTCGGCGGCAGGGGAAGAAGGCGGCGACGACGATTCCCGAAGAGGGGGAGGAAGAAGAACCCAGAGATTTGGACAAGAGGTTCGGATTCTCGAAGGAGTTCACCAGTAGACTGGAGGTTGGGGAAGAAGTAGGCCGAGGGCATTTTGGGTATACTTGCTCTGCTAGGTTCAAGAAAGGCCAGCTTAAGGGTCATCAAGTTGCAGTGAAGGTCATCCCTAAAGCTAAGATGACAACGGCAATTGCAATTGAAGATGTAAGAAGGGAGGTCAAAATATTACGAGCTTTGACCGGACACGAGAATTTGGTACAATTCTATGATGCATTTGAAGACCAAGAAAATGTCTACATTGTAATGGAGTTATGTGAAGGAGGAGAGCTTTTAGATAGGATACTTTCAAGAGGAGGGAAATACTCAGAAGATGATGCAAAGGCTGTCATGGTACAAATACTAAATGTTGTTGCGTTTTGTCATCTTCAGGGTATCGTGCACCGAGATCTTAAGCCAGAGAATTTTTTGTACACTTCAAAGGATGAGAACTCTAAATTAAAAGCTATTGACTTTGGGTTATCGGACTTTGTCAGACCAGATGAAAGGCTCAATGACATTGTTGGAAGTGCATTCTACGTGGCCCCTGAAGTTCTACATCGATCTTACAGTACAGAAGCTGATGTGTGGAGTCTAGGTGTGATAGCATATATTCTTCTATGTGGTAGTCGCCCATTTTGGGCACGAACAGAGTCCGGTATTTGCAGGGAAGTTCTGAAAGCTGATCCTAGCTTCGATGAAACTCCTTGGCCTTCTTTATCTTCAGAAGCGAAAGATTTTGTCAAGCGCCTGTTAAATAAGGACCCACGAAAGCGAATATCAGCTGCTCAGGCTCTAAGTCACCCTTGGATCCGGAATTACAATAATGTAAAAGTTCCTCTTGATATTCTAATATTTAAACTCATGAGGGCTTATATGCGATCATCGTCCTTGCGCAGGGCTGCCTTAAGGGCCTTGTCAAAGACGTTGACTGCCGACGAGCTTTATTATCTGAGGGAGCAATTTGCTCTGCTGGAGCCGAGCAAAAATGGCAGCATAACATTAGAGAACATCAAGACGGCGCTGAAGAAACATGCAACAGATGCCATGAAAGAGTCCCGCATTTCTTATTTTACAGCCTCGCTGACTTCATTACAATATAGAAGAATGGATTTCGAAGAATTTTGTGCAGCTGCATTGAGTGTGCATCAGCTCGAAGCTCTTGATCGCTGGGAGCAACGTGCCCACTGTGCTTACGAAATTTTTGAGAAAGATGGAAATAGGGCTATCGTCATTGAAGAACTTGCTTCAGAACTTGGACTTGGTCCTTCTGTCCCGGTTCATGTTGTACTCGTCGACTGGATAAGGCACACCGATGGGAAGCTAAGCTTTCCCGGGTTTGTGAAATTGTTGCACGGTGTATCTAGAAAGAAGTAA 1779 0.4666 MGGCTSKPYKPNPYSVRQTEDGHDPYDSSQMPKAPHTPIPNNYHNHRKDDVISGKQSPFFPSYSPSPAHFLKKSPANKSATSMPRRFFLRPFPPLSPAKHIRAVLARRQGKKAATTIPEEGEEEEPRDLDKRFGFSKEFTSRLEVGEEVGRGHFGYTCSARFKKGQLKGHQVAVKVIPKAKMTTAIAIEDVRREVKILRALTGHENLVQFYDAFEDQENVYIVMELCEGGELLDRILSRGGKYSEDDAKAVMVQILNVVAFCHLQGIVHRDLKPENFLYTSKDENSKLKAIDFGLSDFVRPDERLNDIVGSAFYVAPEVLHRSYSTEADVWSLGVIAYILLCGSRPFWARTESGICREVLKADPSFDETPWPSLSSEAKDFVKRLLNKDPRKRISAAQALSHPWIRNYNNVKVPLDILIFKLMRAYMRSSSLRRAALRALSKTLTADELYYLREQFALLEPSKNGSITLENIKTALKKHATDAMKESRISYFTASLTSLQYRRMDFEEFCAAALSVHQLEALDRWEQRAHCAYEIFEKDGNRAIVIEELASELGLGPSVPVHVVLVDWIRHTDGKLSFPGFVKLLHGVSRKK 592
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa01g3900 592 FunFam CDPK-related kinase 3 135 307 - -
Bisa01g3900 592 Pfam Protein kinase domain 144 405 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa01g3900 592 SMART serkin_6 143 405 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa01g3900 592 Gene3D Transferase(Phosphotransferase) domain 1 233 422 - -
Bisa01g3900 592 PANTHER SERINE/THREONINE-PROTEIN KINASE 127 565 - -
Bisa01g3900 592 ProSiteProfiles Protein kinase domain profile. 143 405 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa01g3900 592 ProSitePatterns Serine/Threonine protein kinases active-site signature. 267 279 IPR008271 GO:0004672|GO:0006468
Bisa01g3900 592 MobiDBLite consensus disorder prediction 113 128 - -
Bisa01g3900 592 MobiDBLite consensus disorder prediction 1 59 - -
Bisa01g3900 592 CDD STKc_CAMK 144 404 - -
Bisa01g3900 592 Gene3D - 430 584 - -
Bisa01g3900 592 SUPERFAMILY EF-hand 436 586 IPR011992 -
Bisa01g3900 592 Gene3D Phosphorylase Kinase; domain 1 145 232 - -
Bisa01g3900 592 SUPERFAMILY Protein kinase-like (PK-like) 139 444 IPR011009 -
Bisa01g3900 592 FunFam Calcium-dependent protein kinase SK5 315 410 - -
Bisa01g3900 592 FunFam CDPK-related kinase 1 136 231 - -
Bisa01g3900 592 ProSitePatterns Protein kinases ATP-binding region signature. 149 175 IPR017441 GO:0005524
Bisa01g3900 592 Gene3D - 423 514 - -
Bisa01g3900 592 MobiDBLite consensus disorder prediction 107 128 - -
Bisa01g3900 592 FunFam CDPK-related kinase 1 441 514 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa01g3900 Bisa-ChrBisa01 94154872 94162094 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa01g3900 1 591 EF-hand Containing Proteins AT3G50530 70.079 0.0 884
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Bisa01g3900 Pkinase 1.4e-71 CL0016