Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa01g3893 ATGGGTTCGGTTCCTGCAGAACTGAGCTTGGATTTGAGACCCACCTTTGTTCCCAGGACGATCAGTGATTTTCTCTACGAGGTTTCCACAATCGGAAACGCCTCCGAGAAGCTGTCGAGGCTCGATGAGTTTCTTAAGAGATTGGAAGAGGAAATGAGGAAGATCGACGCTTTTAAGCGTGAGCTTCCTCTCTGCATGCTCCTATTAAATGATGCAATCTTAACTCTGAAGGAGGAGTCGGCGAAATTTAGGACGCCTATTTCTCAGCCAGTATTGGAAGAATTTATACCTTTGAAGAGAGAATGTGAGCAGAAAGAGGAAGATAAAAAGGAAAAGGAATGCAGAGATAAGAAAAATTGGATGAGTTCTGTTCAGCTCTGGAATAATGCTAATTGTGCTACTACTAATAATGCTTATGAGCAAAAACAGCACCGTAATTTAGATAACAAGAAAAGCGAAGAGGAAGGACAATCTGTTGCTGAGGACCCATTCCAATCTCGTAGAAACAGAAACAATGTGTGCAGGGCATTCTTGCCTTTCACAACATACTCTTCTATGCCTGTGACAACAGTGGCATCAAAGGAAGAGAAAGAAGACTCCATTAATGGGCTTTCTCTTCTGACTCCAGGAATGAAAAATTTAACGGAGGGATCTGGTTCAAGTGGATCAAGAACTAGCTCTAGCAGAGCAGTTTCTTCTTCTAATCCTAGTGCACAGACAATTATACCCACTGGACAGCAGCAGCCACCACAGCAGGCTGCCCGGAAACAGAGGAGATGCTGGTCGCCAGAGTTGCATCGGCGATTTGTTAATGCGCTACAGCAACTCGGAGGTTCTCAAGCGGCAACTCCAAAGCAAATCAGAGAACTCATGCAGGTTGATGGCCTTACCAATGATGAAGTAAAGAGTCATTTACAAAAATACCGCCTTCACACTCGAAGAGTCCCGGCTACCACGGGAGCACCTGCTGCTAATCAGTCTGTTCTAGTTCTTGGAGGTTTGTGGATGTCCCAAGATCAATACAATGACTCCTCAAAGGCTAGCAGTTCTGGGTCCGGTTCGCCTCAAGGCCCCCTTCAGTTAGCAGCATCTGGTGGAGGGACATCCCCAACTGAAGGTGATAGCATGGAAGATGATGAAGATGAAAAATCTGAGGGCTTTAGCTGGAAAAGTCACATTCACAAACCTGGAAAAGATGATGTATAG 1206 0.4519 MGSVPAELSLDLRPTFVPRTISDFLYEVSTIGNASEKLSRLDEFLKRLEEEMRKIDAFKRELPLCMLLLNDAILTLKEESAKFRTPISQPVLEEFIPLKRECEQKEEDKKEKECRDKKNWMSSVQLWNNANCATTNNAYEQKQHRNLDNKKSEEEGQSVAEDPFQSRRNRNNVCRAFLPFTTYSSMPVTTVASKEEKEDSINGLSLLTPGMKNLTEGSGSSGSRTSSSRAVSSSNPSAQTIIPTGQQQPPQQAARKQRRCWSPELHRRFVNALQQLGGSQAATPKQIRELMQVDGLTNDEVKSHLQKYRLHTRRVPATTGAPAANQSVLVLGGLWMSQDQYNDSSKASSSGSGSPQGPLQLAASGGGTSPTEGDSMEDDEDEKSEGFSWKSHIHKPGKDDV 401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa01g3893 401 MobiDBLite consensus disorder prediction 341 371 - -
Bisa01g3893 401 SUPERFAMILY Homeodomain-like 254 314 IPR009057 -
Bisa01g3893 401 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 253 313 IPR017930 -
Bisa01g3893 401 NCBIfam myb-like DNA-binding domain, SHAQKYF class 256 311 IPR006447 GO:0003677
Bisa01g3893 401 Coils Coil 401 401 - -
Bisa01g3893 401 Pfam Myb-like DNA-binding domain 258 309 IPR001005 -
Bisa01g3893 401 MobiDBLite consensus disorder prediction 383 401 - -
Bisa01g3893 401 MobiDBLite consensus disorder prediction 206 255 - -
Bisa01g3893 401 Coils Coil 31 61 - -
Bisa01g3893 401 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 9 390 IPR044787 GO:0003700|GO:0006355
Bisa01g3893 401 MobiDBLite consensus disorder prediction 190 257 - -
Bisa01g3893 401 FunFam Myb family transcription factor 255 313 - -
Bisa01g3893 401 MobiDBLite consensus disorder prediction 143 161 - -
Bisa01g3893 401 MobiDBLite consensus disorder prediction 341 401 - -
Bisa01g3893 401 MobiDBLite consensus disorder prediction 141 166 - -
Bisa01g3893 401 Gene3D - 255 313 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa01g3893 Bisa-ChrBisa01 93996421 93998473 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa01g3893 6 336 G2-like Transcription Factor Family AT2G03500 38.810 2.09e-62 205
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Bisa01g3893 Myb_DNA-binding 6.5e-07 CL0123