Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa01g3869 ATGCCGCGCCCTTGTTTCCACAAGCTTGTTCTTAAATCTACCCTACAAGCCAGACAACTGAGGATTCCAGACCATTTTTTGAGGAAGTGTGGGGGTGAGCTCTCTACAATTGCTAACCTTACTGTTCCTGATGGCAACATCTGGCGTATTGGATTAAAAAAGGCAGACAACAAATTTTGGTTCCATGATGGTTGGCAGGAATTTGTTCAGCGATACTCCATTGGTGTTGGATATTTCTTGGTGTTTAGATATGAAGGGAATTCATCTTTCAAGGTTCACATTTTCCATTTGGCTTCTTCCGAGATAAACTATCAACTGGCCACACAAAGCAGTAATGATGGGCCTTATTTCATTAATCAAAATCGTATTTTTGACGAAATGGAAGATGAAGACTCCATTGATTACCAGGACTCAACACCTTCACATCTAACTACTGGTGCATTGCAAAACAAGGCTTTTCCTGGATCTGCAGGTCAATTGACACCTACTAAGAACTATACTTCTCCACCATTGCAGAATTTGTTTAACGGGTCTAAGCTTAATAGCGTAAACTGGGGAGAGAGTGGAAATGTCCTTTCTTCAAAGGGTGCCAATTTACAAAACAATCAATTGACCAGAGATATAGGTCTTCAGTTTAACGCTGCTGAGTTTAAGAGGTCTACTGAAGAATTGAAATTGAATCATACCTCTAATGACGAAATGCAAAGAGCTAAAAAAACAGTAAGAAAAAGGCGGAAAATTGATCCTGATGGTGAAGAATCCTCTCCTCATCATGAAGAGGAGGTAGAAATGCGCTTCAGATTTTACGAAAGTGCTTCTGCTAGAAAAAGAACTGTGACAGCCGAAGAAAGAGAAAGGGCAGTTAATGCAGCAAAAGCATTTGAACCACCTAATCCTTTCTGTCGGGTTGTCCTGCGACCCTCCTATTTGTATAGGGGATGCATAATGTACTTGCCGTCCTGTTTTGCAGAAAAGCATTTGAATGGGGTTTCAGGTTTCATCAAACTTCAGAATCCAGATGGGAGACAGTGGCCGGTTCGCTGCCTTTACAGAGGGGGTAGAGCAAAGTTAAGCCAGGGGTGGTTTGAATTTTCCCAGGATAACAATCTAGGGGAAGGCGATGTCTGTGTTTTTGAGCTGCTTAGAATGAGGGATGTAGTGCTGAAAGTCACTCTATTCCGAGTCCAGGAGGAGGACTTGGGACTGTTGAATTCACCGATGCAGCAAAACCAAAGTATGAGCCCAACATCTAAACTGTTGAATACCCCCTTGCAGCGAAATGTGAGCCCTACTAAGCTGATTAGAAATTAG 1311 0.4226 MPRPCFHKLVLKSTLQARQLRIPDHFLRKCGGELSTIANLTVPDGNIWRIGLKKADNKFWFHDGWQEFVQRYSIGVGYFLVFRYEGNSSFKVHIFHLASSEINYQLATQSSNDGPYFINQNRIFDEMEDEDSIDYQDSTPSHLTTGALQNKAFPGSAGQLTPTKNYTSPPLQNLFNGSKLNSVNWGESGNVLSSKGANLQNNQLTRDIGLQFNAAEFKRSTEELKLNHTSNDEMQRAKKTVRKRRKIDPDGEESSPHHEEEVEMRFRFYESASARKRTVTAEERERAVNAAKAFEPPNPFCRVVLRPSYLYRGCIMYLPSCFAEKHLNGVSGFIKLQNPDGRQWPVRCLYRGGRAKLSQGWFEFSQDNNLGEGDVCVFELLRMRDVVLKVTLFRVQEEDLGLLNSPMQQNQSMSPTSKLLNTPLQRNVSPTKLIRN 436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa01g3869 436 Gene3D - 1 98 IPR015300 -
Bisa01g3869 436 ProSiteProfiles B3 DNA-binding domain profile. 301 396 IPR003340 GO:0003677
Bisa01g3869 436 Pfam B3 DNA binding domain 8 95 IPR003340 GO:0003677
Bisa01g3869 436 Pfam B3 DNA binding domain 304 395 IPR003340 GO:0003677
Bisa01g3869 436 Gene3D - 278 398 IPR015300 -
Bisa01g3869 436 ProSiteProfiles B3 DNA-binding domain profile. 5 98 IPR003340 GO:0003677
Bisa01g3869 436 CDD B3_DNA 4 95 IPR003340 GO:0003677
Bisa01g3869 436 SUPERFAMILY DNA-binding pseudobarrel domain 3 96 IPR015300 -
Bisa01g3869 436 MobiDBLite consensus disorder prediction 153 172 - -
Bisa01g3869 436 PANTHER B3 DOMAIN-CONTAINING 3 384 - -
Bisa01g3869 436 CDD B3_DNA 299 394 IPR003340 GO:0003677
Bisa01g3869 436 SMART B3_2 301 396 IPR003340 GO:0003677
Bisa01g3869 436 SMART B3_2 6 98 IPR003340 GO:0003677
Bisa01g3869 436 MobiDBLite consensus disorder prediction 228 262 - -
Bisa01g3869 436 SUPERFAMILY DNA-binding pseudobarrel domain 294 395 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa01g3869 Bisa-ChrBisa01 93486138 93489926 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa01g3869 1 401 B3 DNA Binding Superfamily AT3G18990 51.365 6.90e-132 383
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Bisa01g3869 B3 2.4e-18 CL0405