Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa01g3867 ATGGAAAAGGAAAAGAGGTTCAAGAGAATGAAAAAGGAAGGAAGTCATCGGCGGCTGTCAGGCTCGCCAGAGGGGAAGCCGGCGCACTTCTTGAAGTTCATACTTCCAACTACCATCCTTGACAAGAAACTGAGACTTCCGGTGAAGTTTGTGGGAGACCACGGCGATGATTTGTCTTCCATTGTCACCATATCTGATCCAAACCTTCGAGAATGGAAAATGGGTCTGGAGAAGAGTGAAAGCAATGTTTGGTTCTTCGACGGTTGGGAGAAATTCGTGGAATACTATTCCATCACTTGCCAGAATTTTCTGGTTTTCAGATATGAAGGAAACTCGAAGTTTCATGTCCTCATATTCGACGTGAGTGGCACTGAGATTCCATACCCTGAAAATCCAAATCGTAACACAGAACTCCCCGAAGACGATGTTGTCATATTGGAATCATCAGAAAACAATGACGATGATTATCAATGGGACAGTGCTCACGATAATGATGACAGTTATACTGAAGAAGAAGAAGATTATACTGACCATGCATATTACAGCAGCTCTTCACCGTCTAGATCTCCTTCTCCATTCAGTCCAAAAGGAAAAGGATTCACCAAGTTCATCGATAAAAGATTAAAAAGAGAAAGAGACACAGGCAGAAGAAGAGAGAAAGAATATTCTCCTTCTTCAAGATTTGGATCTCAAAGAAAGAGAAAGAGGCAAGTGAGTGAGAGTGAATATCCAGAGAGTGATGAAGAAGTAGAAGAAGAAGGACCTTCGAGAAGATCAAAAGGTGGAGAGCGTCGCAGATGCAGAGAAGGGAGATCTGGGTACAAAGTGAAGAAGAAGCAGAGAGTGAAATGGGTTCGAACAGAAACAGTGAAATCAAAGACATACAAGAAGAGGAAAATTTCTTCCGGAGAGAGAGATATGGTCATGAGAGCAGCTCGAGAGTTCAGGTCTGAGTTTCCTTCCTTCAGATCCGTCTTGAGGCCTCACAACTTGTACAACAGCTTTGTGTACGTGCCTGCATGTTTTGCTAAGAAGTACTTGGATGGTCGATCAGAAATCATAAGACTTGAGAGCTCGGATGGGAGAAATGGAAAACAATGGCCTGCTCGATGGTTAAACAGGAATTCGTCTGGGGCTGGAAAAAGCATAGGCAAAGGATGGGCCAAGTTTGCCATGGACAATCACCTTCAAGAAGGTGATGTCTGTGTCTTCCAGCTCGTCAAGGGGACCAAAATTGTCTTAAGAGTCAAAATGTTTCGTGTCAACGACCATGGAGATAGATACAAATGA 1290 0.4333 MEKEKRFKRMKKEGSHRRLSGSPEGKPAHFLKFILPTTILDKKLRLPVKFVGDHGDDLSSIVTISDPNLREWKMGLEKSESNVWFFDGWEKFVEYYSITCQNFLVFRYEGNSKFHVLIFDVSGTEIPYPENPNRNTELPEDDVVILESSENNDDDYQWDSAHDNDDSYTEEEEDYTDHAYYSSSSPSRSPSPFSPKGKGFTKFIDKRLKRERDTGRRREKEYSPSSRFGSQRKRKRQVSESEYPESDEEVEEEGPSRRSKGGERRRCREGRSGYKVKKKQRVKWVRTETVKSKTYKKRKISSGERDMVMRAAREFRSEFPSFRSVLRPHNLYNSFVYVPACFAKKYLDGRSEIIRLESSDGRNGKQWPARWLNRNSSGAGKSIGKGWAKFAMDNHLQEGDVCVFQLVKGTKIVLRVKMFRVNDHGDRYK 429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa01g3867 429 Gene3D - 300 424 IPR015300 -
Bisa01g3867 429 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS11G0197600-RELATED 44 422 IPR044837 -
Bisa01g3867 429 ProSiteProfiles B3 DNA-binding domain profile. 321 422 IPR003340 GO:0003677
Bisa01g3867 429 MobiDBLite consensus disorder prediction 200 243 - -
Bisa01g3867 429 CDD B3_DNA 29 120 IPR003340 GO:0003677
Bisa01g3867 429 MobiDBLite consensus disorder prediction 179 194 - -
Bisa01g3867 429 Pfam B3 DNA binding domain 32 120 IPR003340 GO:0003677
Bisa01g3867 429 Pfam B3 DNA binding domain 325 421 IPR003340 GO:0003677
Bisa01g3867 429 MobiDBLite consensus disorder prediction 150 275 - -
Bisa01g3867 429 MobiDBLite consensus disorder prediction 1 24 - -
Bisa01g3867 429 ProSiteProfiles B3 DNA-binding domain profile. 29 122 IPR003340 GO:0003677
Bisa01g3867 429 SUPERFAMILY DNA-binding pseudobarrel domain 315 421 IPR015300 -
Bisa01g3867 429 Gene3D - 23 123 IPR015300 -
Bisa01g3867 429 SUPERFAMILY DNA-binding pseudobarrel domain 25 122 IPR015300 -
Bisa01g3867 429 SMART B3_2 30 122 IPR003340 GO:0003677
Bisa01g3867 429 SMART B3_2 322 422 IPR003340 GO:0003677
Bisa01g3867 429 CDD B3_DNA 320 420 IPR003340 GO:0003677
Bisa01g3867 429 MobiDBLite consensus disorder prediction 251 270 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa01g3867 Bisa-ChrBisa01 93476993 93481085 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa01g3867 30 423 B3 DNA Binding Superfamily AT3G18990 33.333 4.41e-58 193
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Bisa01g3867 B3 8.5e-16 CL0405