Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa01g3830 ATGTCTCCTTCCTCCAAGCGAACCAGACTCGCCGGAGCTCCGGTTGCATCCTCCTTCCCTCCACCGCCTCCCGCCTTCCTCTCCGACGACCACGAGCTCTCCATCATCGTCGCGACGCTCACCAACGTCGTCGCCGGCTCCTCCACTGCCACCGTCTCCGCTGCCACCACCTCCACCAGCGACCTAATTCAAGAAATTCGGCTCCCGCAGATTTCACGGTACTCCGACGCAGTTTCCACTACCGCCTCCGCCTCCGGAGAGCTCGGATCAGGATCCGGATCCTTCCGAATTGCGCCGACCGCTAACATCGAGACCTGCGGCGAATGCGGAATCGAAGGATGCCTAGGTTGCAATTTTTTCCCGGAGGAGAAGAACAAAAGAGGCGGGAGAAGGAGGACGACTACGACGACGACAGCGTCGGCCACTAGGAGGGGGAAGAAGAAGTACAGAGGAGTGAGGCAGAGGCCGTGGGGGAAATGGGCGGCGGAGATCCGAGATCCGAGACGCGCGACCCGAGTGTGGCTCGGGACGTTCAACACGGCGGAGGAAGCCGCCCGTGCGTACGACAACGCGGCGATCGAATTTCGCGGGCCGCGAGCGAAGCTCAATTTCCCGATTCTCGATAATTCGCTGAGTAGTTTTTCGCATTCGCAGTCACAAACAGAGCAAGCAGAGTTCGAAGGCCTAGAGATTGAGCCAGGAAACGGAAATTCAAATCCGGGGAATTACTATGATGCTGTTTGGACGATGGGAATGGAAAATAAGGCGGTGGAAATTGGGAGTAGTAAGGAAAATGAATTCTGGGATGGACTCGGAGATGCTGATTTTCAGCAGTTGATGACGATGATGTCGGATTTTGGAGGGGATAATTCTTCGGACTCTGCTACGACAAATTGTCAGAGTACTCTTAGTTGGTGA 918 0.561 MSPSSKRTRLAGAPVASSFPPPPPAFLSDDHELSIIVATLTNVVAGSSTATVSAATTSTSDLIQEIRLPQISRYSDAVSTTASASGELGSGSGSFRIAPTANIETCGECGIEGCLGCNFFPEEKNKRGGRRRTTTTTTASATRRGKKKYRGVRQRPWGKWAAEIRDPRRATRVWLGTFNTAEEAARAYDNAAIEFRGPRAKLNFPILDNSLSSFSHSQSQTEQAEFEGLEIEPGNGNSNPGNYYDAVWTMGMENKAVEIGSSKENEFWDGLGDADFQQLMTMMSDFGGDNSSDSATTNCQSTLSW 305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa01g3830 305 SMART rav1_2 148 211 IPR001471 GO:0003700|GO:0006355
Bisa01g3830 305 PRINTS Ethylene responsive element binding protein signature 149 160 IPR001471 GO:0003700|GO:0006355
Bisa01g3830 305 PRINTS Ethylene responsive element binding protein signature 171 187 IPR001471 GO:0003700|GO:0006355
Bisa01g3830 305 MobiDBLite consensus disorder prediction 125 148 - -
Bisa01g3830 305 PANTHER DNA-BINDING DOMAIN 126 240 IPR044808 GO:0003700|GO:0009873
Bisa01g3830 305 CDD AP2 147 207 IPR001471 GO:0003700|GO:0006355
Bisa01g3830 305 FunFam Ethylene-responsive transcription factor 2 147 206 - -
Bisa01g3830 305 Pfam AP2 domain 148 197 IPR001471 GO:0003700|GO:0006355
Bisa01g3830 305 Gene3D AP2/ERF domain 147 207 IPR036955 GO:0003700|GO:0006355
Bisa01g3830 305 MobiDBLite consensus disorder prediction 1 23 - -
Bisa01g3830 305 ProSiteProfiles AP2/ERF domain profile. 148 205 IPR001471 GO:0003700|GO:0006355
Bisa01g3830 305 SUPERFAMILY DNA-binding domain 148 206 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa01g3830 Bisa-ChrBisa01 92770007 92770924 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa01g3830 1 212 AP2-EREBP Transcription Factor Family AT4G34410 40.343 6.41e-35 125
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Bisa01g3830 AP2 6.3e-16 CL0081