Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa01g3806 ATGTCTGATAGCTCTGGGAAAAGCAAAGGCAAATGCCCCATCACCAATAATATTCCTCCCAAATCACCCTCTTCTTTCCAAGCAGAAGAAGAAGAAGAAGACAGAACCATCAGCCTCAAAGATAGCGATGGTGGTGAGTCTGATGAACATGACCATGAAACTCACATATGGACTGAGAGAGAGAGAAGGAAGAAGATGAGGACCATGTTTGGTACTCTTCATGCTTTGCTTCCTCACCTTTCTTCTAAGGCAGACAAGTCCACCATTGTTGACGAAGCAGTGAATACCATCAAAACCCTCGAGCAGACGCTGCAAAATCTCCAGAAACAAAAGCTTGGGAGGCTCCAATCTATGTGTCATCCCTATGGCAGTAATATTTCAAGAGAGGCGTTCATGGCTGATCACCCAGCACCATCGTCTTCTGCAAATAATGCTTCAGCACATAATTACCCAGTAAAATTTCAAACCTGGGTTTCTCCGAACGTGGTATTTAGTGTCTGTGGGGACGAAGCTCAGTTCAGTGTGTGCTGTCCCAAGAAGCCATGCCTCTTAACCTCAATCTGCTTTGTTCTTGAAAAGTACAAGATTGAGGTTTTGTCTGCCCATATCTCTTCTGACAATAATCGAAGCTCCTGCATGATTCAAGCACATGCAAGAAGAGATCATTCGGATCTGTTTCCAGAGATTCCAGAGGAGGAAATATTTAAGCAAGCAGCTTCAGAAATAATACAGTGGCTCTCTTAA 744 0.4382 MSDSSGKSKGKCPITNNIPPKSPSSFQAEEEEEDRTISLKDSDGGESDEHDHETHIWTERERRKKMRTMFGTLHALLPHLSSKADKSTIVDEAVNTIKTLEQTLQNLQKQKLGRLQSMCHPYGSNISREAFMADHPAPSSSANNASAHNYPVKFQTWVSPNVVFSVCGDEAQFSVCCPKKPCLLTSICFVLEKYKIEVLSAHISSDNNRSSCMIQAHARRDHSDLFPEIPEEEIFKQAASEIIQWLS 247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa01g3806 247 Gene3D - 41 117 IPR036638 GO:0046983
Bisa01g3806 247 PANTHER BHLH DOMAIN-CONTAINING PROTEIN 5 246 IPR044278 GO:0003700|GO:0006355|GO:0009960
Bisa01g3806 247 SMART finulus 58 106 IPR011598 GO:0046983
Bisa01g3806 247 CDD bHLH_AtbHLH_like 55 108 IPR045239 -
Bisa01g3806 247 Pfam Helix-loop-helix DNA-binding domain 53 101 IPR011598 GO:0046983
Bisa01g3806 247 Coils Coil 90 110 - -
Bisa01g3806 247 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 50 100 IPR011598 GO:0046983
Bisa01g3806 247 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 48 112 IPR036638 GO:0046983
Bisa01g3806 247 MobiDBLite consensus disorder prediction 26 56 - -
Bisa01g3806 247 MobiDBLite consensus disorder prediction 1 24 - -
Bisa01g3806 247 MobiDBLite consensus disorder prediction 1 56 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa01g3806 Bisa-ChrBisa01 92239325 92244917 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa01g3806 2 247 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G49770 39.175 2.01e-50 165
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Bisa01g3806 HLH 2.3e-08 No_clan