Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa01g3780 ATGGAAAAATCCACAAATTACATACCTTATTACACAGCAACAATATCCATCACATCTATTATTCTATGTACCCTCACAGTAACCTCCCAGATCATCCCTGACCCTGAATCTCCATATTCATCACCAACCCCATTAATCCCTGAACTTTTGAACTTCATAGACCAGAGACTTGCTATAATCTACCCCATCATCCAAACCTTCAAGAACACAATAACCTCGGACCCACTAGGAGTGACCACCACATGGGTTGGTCCCAACATCTGCAACTACACAGGCTTCTACTGCGACAACCCACCCGACAACCTCACCGCCACCGCTGTCGCCTCCATCGACTTCAACGGCTTCGGGCTGGCTGCCCCCTCCCTCGACGGCTTCATCGACGGGCTCCCCGACCTGGCCCTCTTCCACGCCAACTCCAACAACTTCTCAGGGACCATACCGCCCGGAATAGCGAAGCTCAAGTACTTATATGAGCTAGATGTTAGTAATAATTTGCTTTCTGGGGCATTTCCCGAGGCGGTTCTGAACATGCCCACGTTGTCGTTCTTGGACATTAGGTTTAACCTCTTCTCCGGTATGGTTCCGCCGGAGATTTTCATGCAGAGTCTCGACGTGCTTTTCTTCAATGATAATGATTTCATGCAGGCACTTCCCCAGGACTTGGGAGATACGAAGGTGTTGTATTTGACTTTGGCTAATAACAGATTTACTGGACCTATTCCGAGGAGCATTGGAAGAGCCTCGCAAACGTTGTTGGAAGTGTTGTTCCTGAACAACCAGTTAACAGGTTGTCTTCCTTACGAGTTAGGATTCCTAACAAAGCTCCGGCTCCTAGACGCCGGGAACAACCTGTTGACCGGGCTGTTGCCATGGTCGCTGGGGTGCTTGGAGGCGGTGGAGCAGCTCAATCTCGCCGGAAACCTGCTGTACGGCCCGGTGCCGGAGGTGTTGTGTGCAGTGGGGAGTGTGGTGAACCTGTCCTTATCTGATAACTACTTTACAGGGGTGGGACCGTTGTGCAGGAGGCTCATTAAGAGAGGAGTTCTCGATGTGAGGAAGAACTGTATCTATGGATATGGCATTCTGCATCAGAGACCTTTGGAGGAGTGCGTCTCCTTCTTCTTGCACCCAAGGTCCTGTTACCATCGGTCGACGTCGTTTTATCACTTCTTGCCTTGTAGGCTTCCTCCTCTTCCTCCTTGGAGGAACCATAATCATAGCCCTAGGGTTACTCTTACACCTAAATCTAATAGACATTTGCTTTCCTACTCTGCTCTTTCTAGAAATAGTGTTGTAATTTTTGAGTGTTTTGGAGGAATATTATTACATACAGCCCAAAAAAATACAAAAGATTAG 1356 0.4838 MEKSTNYIPYYTATISITSIILCTLTVTSQIIPDPESPYSSPTPLIPELLNFIDQRLAIIYPIIQTFKNTITSDPLGVTTTWVGPNICNYTGFYCDNPPDNLTATAVASIDFNGFGLAAPSLDGFIDGLPDLALFHANSNNFSGTIPPGIAKLKYLYELDVSNNLLSGAFPEAVLNMPTLSFLDIRFNLFSGMVPPEIFMQSLDVLFFNDNDFMQALPQDLGDTKVLYLTLANNRFTGPIPRSIGRASQTLLEVLFLNNQLTGCLPYELGFLTKLRLLDAGNNLLTGLLPWSLGCLEAVEQLNLAGNLLYGPVPEVLCAVGSVVNLSLSDNYFTGVGPLCRRLIKRGVLDVRKNCIYGYGILHQRPLEECVSFFLHPRSCYHRSTSFYHFLPCRLPPLPPWRNHNHSPRVTLTPKSNRHLLSYSALSRNSVVIFECFGGILLHTAQKNTKD 451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa01g3780 451 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 34 399 - -
Bisa01g3780 451 SUPERFAMILY L domain-like 68 357 - -
Bisa01g3780 451 Gene3D Ribonuclease Inhibitor 63 223 IPR032675 -
Bisa01g3780 451 Gene3D Ribonuclease Inhibitor 228 376 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa01g3780 Bisa-ChrBisa01 91638186 91640987 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa01g3780 52 377 Leucine-rich Repeat extension Gene Families AT3G24480 43.558 1.29e-82 261