Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa01g3778 ATGATCAACGCTTCTCCATCTATCCACTGCATCTATCTCCATATCGCTTTGATTCTGCTTCATTTCTGGCTCTTGATTTTTCTGTGTAAGCTGCAACCAGAAAATTGCTGTAGGGTGTCTGCTGATAGATCCAATTTACCTCCTAGTAAAGATCCTTCTATTTCACCTCCTGTTAAAGATCCTGAAAGACAATCTTCTGCTTCTGTAGTCTCTGAGGAAGATAATCCTCCAGATGAGACATCATCTAGGCTATCTTCTGCTGGCTTATCATCTTGGGCAAAAAGTTTGAAAATTCCTCAGCAATTTTCTGGCTCTCAAGACGACTTAGCAAGTGAAAATTCTGGAAAATCAACTTTTGCACGCTTTACCAGTAATTTAGCATCGCGGTTGTCTCCAAGACAATCTCCATCAGATGACGGTTCCAATGAAGCTGCTGGTCAATCTAATTTGATTGGAAGTATCACCAAAGGCCTGGTTGACTCATCTAGGAATGCCGTGAAAGCTGTGCAGGTCAAGGCCCGACATGTTGTTTCTCAGAATAAACGTAGATACCAGGATGGAGGATTTGATCTAGATATGACGTACATCACAGAAAATATTATTGCTATGGGATTCCCTGCTGGCGATATAAGCTCTGGGTTTTTTGGTTACGTAGAAGGCCTTTACAGAAACCACATGGAAGAAGTGATTAGGTTTTTTGAGACTAATCATAAGGGAAAATACAAAGTATACAATCTTTGTTCTGAGCGGCTGTATGATGCATCATTATTCGAGGGAAAGGTGGCTAGTTGCCCATTTGATGACCATAATTGCCCTCCAATTCAACTGATTATATCATTTTGTCAAAGTGCTTACTCTTGGTTAAAGCAAGACATTGAGAATGTTGTGGTTGTCCACTGTAAAGCTGGAATGGCAAGGACAGGGTTGATGATTTCTAGTCTTCTATTATTCTTAAAGTTCTTCCCAACTGCTGAGGAATCCATTGATTATTACAATCAGAAAAGGTGTATTGATGGAAAGGGACTTGTTCTGCCTAGTCAGATTAGGTATGTCAAATATTTTGAACGTGTCTTGACTTACTTCAATGTCGAAAATCCTCCTGCTCGCAGGTGCATGCTTAGGGGATTCCGGCTTCACAGGTGTCCTTACTGGATCAGGCCTTCTATAACTGTCTCAGATCATAGCGGTGTTTTGTTCTCAACCAAAAAGCATCCAAGAACCAAGGATCTTAATTCAGAAGATATTTGGTTTAGTGCACCAAAGAAGGGAGTGATGGTCTTTGCCTTGCCAGGGGAGCCTGGTCTTACAGAGGTGGCTGGGGACTTCAAAATCCATTTTCATGATCGCCAAGGAGATTTTTACTGTTGGTTGAACACAACTATGACAGAAAACAGGAAAGTATTGACCACTAATGATCTTGATGGTTTTGACAAGAGAAAATTGCCTTCACCTGGATTCCTGGTTGAGGTGGTGCTAGTGGATTATAATGGCAATGTGACAACAACCCAACCTGAAACTGTTACCAATAAATCGGATGAGAGGTCAAGTAGTAGTCCTGCCCCAGCTGATGCGAGCACAACAGTACCAAATGCAGCCAAAGAGCCGGAAAATCATGAAAAAGAAGACGATGTGTTTTCAGATGGTGAGGCAGAGGATTCTTCGAGAAGCAAACAGGCAAAAGCAGGTTCTGAAGCAGTCACTAATTCTACCACTGGATCTGAACCTAAAACCTCAAATCAAATAACAAGTTTAACGCATGCAACAGAACAAATTTCTTTGGGAGACACAAGTAGTGCTACTAAACCAAAAAGCGATGGTTCCAGCCTCGAGGCTCCCAGCTCAGCAAGTGAATTCAAGGCAATGGCTGCAGATGCTTCTGTTTTTACATTTGGAGATGATGAAGACTACGAAAGTGAGTGA 1920 0.4177 MINASPSIHCIYLHIALILLHFWLLIFLCKLQPENCCRVSADRSNLPPSKDPSISPPVKDPERQSSASVVSEEDNPPDETSSRLSSAGLSSWAKSLKIPQQFSGSQDDLASENSGKSTFARFTSNLASRLSPRQSPSDDGSNEAAGQSNLIGSITKGLVDSSRNAVKAVQVKARHVVSQNKRRYQDGGFDLDMTYITENIIAMGFPAGDISSGFFGYVEGLYRNHMEEVIRFFETNHKGKYKVYNLCSERLYDASLFEGKVASCPFDDHNCPPIQLIISFCQSAYSWLKQDIENVVVVHCKAGMARTGLMISSLLLFLKFFPTAEESIDYYNQKRCIDGKGLVLPSQIRYVKYFERVLTYFNVENPPARRCMLRGFRLHRCPYWIRPSITVSDHSGVLFSTKKHPRTKDLNSEDIWFSAPKKGVMVFALPGEPGLTEVAGDFKIHFHDRQGDFYCWLNTTMTENRKVLTTNDLDGFDKRKLPSPGFLVEVVLVDYNGNVTTTQPETVTNKSDERSSSSPAPADASTTVPNAAKEPENHEKEDDVFSDGEAEDSSRSKQAKAGSEAVTNSTTGSEPKTSNQITSLTHATEQISLGDTSSATKPKSDGSSLEAPSSASEFKAMAADASVFTFGDDEDYESE 639
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa01g3778 639 FunFam Phosphatidylinositol 3,4,5-trisphosphate 3-phosphatase TPTE2 167 364 - -
Bisa01g3778 639 ProSitePatterns Tyrosine specific protein phosphatases active site. 298 308 IPR016130 GO:0016311|GO:0016791
Bisa01g3778 639 MobiDBLite consensus disorder prediction 500 617 - -
Bisa01g3778 639 MobiDBLite consensus disorder prediction 559 614 - -
Bisa01g3778 639 MobiDBLite consensus disorder prediction 533 558 - -
Bisa01g3778 639 ProSiteProfiles C2 tensin-type domain profile. 368 495 IPR014020 -
Bisa01g3778 639 SMART PTEN_C2_2 366 494 IPR014020 -
Bisa01g3778 639 MobiDBLite consensus disorder prediction 41 86 - -
Bisa01g3778 639 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 275 335 IPR000387 GO:0016311|GO:0016791
Bisa01g3778 639 MobiDBLite consensus disorder prediction 59 86 - -
Bisa01g3778 639 MobiDBLite consensus disorder prediction 125 147 - -
Bisa01g3778 639 CDD PTP_PTEN 192 356 IPR045101 GO:0016791
Bisa01g3778 639 ProSiteProfiles Phosphatase tensin-type domain profile. 182 361 IPR029023 -
Bisa01g3778 639 MobiDBLite consensus disorder prediction 500 525 - -
Bisa01g3778 639 Gene3D Protein tyrosine phosphatase superfamily 167 364 IPR029021 -
Bisa01g3778 639 PANTHER PHOSPHATASE WITH HOMOLOGY TO TENSIN 159 618 - -
Bisa01g3778 639 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 195 362 IPR029021 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa01g3778 Bisa-ChrBisa01 91575019 91585747 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa01g3778 74 639 Protein tyrosine phosphatase (PTP) family AT3G19420 67.637 0.0 825