Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa01g3764 ATGGAAGCGATGCAGGGAGAGGTGGATCGGATCAGGGGACCATGGAGCCCCGAGGAGGATGAGTTGTTGAAGAAGCTCGTGGTACGGCATGGCGCGCGAAATTGGTCGACTATTAGCAAGGTGATCCCCGGGCGGTCGGGGAAGTCTTGCCGGCTCCGGTGGTGCAACCAGCTCTCGCCGGAGGTGGAGCGCGGGCCCTTCACCCCGGAGGAGGACGAGATCATCGTCCAGGCGCATGCCAAGTTCGGCAACAAGTGGGCCACCATAGCCAAGCTCCTCAACGGTCGTACGGATAACTCCATCAAGAACCACTGGAACTCGACCTTGAAGCGCAAGCACGCGTCCTTGATCGCCGATTCGGACGACCCATCGCTTCAACCGGCGAAGAAACAGGCCACCGCCGATCGATCTCCGGCGATCTCAGCCGGTCAATGCTACAGTCCGAGTAGCCAATCTGGATCGGATGTCAGCGATTCGGGTCTTCAGGTAGTCTCTAATTCTTCGACTCTGATTCGGCCTGTAGCGAGAAATGGTGCGTTCTCGAACAACGATCCGTCAACAGATCTCTCTTTGTCTCTTCCTGGATCGAACAAGCTATGGAGGATTGAAGATTCAGGTGCTATTACAGAGCACGCGAAGGCAATATTGGTACCATCGGAAAGGAAATACAGTGGAATATCGACACTTGGGCCAGATTTACTCTCAATGATGCAGGAGATGATAAAGGAAGAGGTGAGAAATTACATGGCGGCGTTGTGA 759 0.5494 MEAMQGEVDRIRGPWSPEEDELLKKLVVRHGARNWSTISKVIPGRSGKSCRLRWCNQLSPEVERGPFTPEEDEIIVQAHAKFGNKWATIAKLLNGRTDNSIKNHWNSTLKRKHASLIADSDDPSLQPAKKQATADRSPAISAGQCYSPSSQSGSDVSDSGLQVVSNSSTLIRPVARNGAFSNNDPSTDLSLSLPGSNKLWRIEDSGAITEHAKAILVPSERKYSGISTLGPDLLSMMQEMIKEEVRNYMAAL 252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa01g3764 252 ProSiteProfiles Myb-like domain profile. 7 58 IPR001005 -
Bisa01g3764 252 FunFam Transcription factor MYB44 66 112 - -
Bisa01g3764 252 Pfam Myb-like DNA-binding domain 12 58 IPR001005 -
Bisa01g3764 252 Pfam Myb-like DNA-binding domain 64 108 IPR001005 -
Bisa01g3764 252 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 7 58 IPR017930 -
Bisa01g3764 252 FunFam MYB transcription factor 12 63 - -
Bisa01g3764 252 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 59 113 IPR017930 -
Bisa01g3764 252 PANTHER MYB PROTEIN-RELATED 12 136 - -
Bisa01g3764 252 CDD SANT 14 56 IPR001005 -
Bisa01g3764 252 Gene3D - 66 138 - -
Bisa01g3764 252 MobiDBLite consensus disorder prediction 126 161 - -
Bisa01g3764 252 MobiDBLite consensus disorder prediction 117 161 - -
Bisa01g3764 252 SMART sant 63 111 IPR001005 -
Bisa01g3764 252 SMART sant 11 60 IPR001005 -
Bisa01g3764 252 ProSiteProfiles Myb-like domain profile. 59 109 IPR001005 -
Bisa01g3764 252 Gene3D - 11 63 - -
Bisa01g3764 252 SUPERFAMILY Homeodomain-like 9 105 IPR009057 -
Bisa01g3764 252 CDD SANT 66 109 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa01g3764 Bisa-ChrBisa01 91103638 91104396 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa01g3764 8 252 MYB Transcription Factor Family AT4G37260 48.540 6.29e-75 229
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Bisa01g3764 Myb_DNA-binding 1.2e-17 CL0123