Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa01g3707 ATGACGAGTGCTTCGGAGCTGTTCTACAATAGGAGGTATCGTTTGGGGCGAACCACTAACGATCTAGGGTTCGATTCGTTGTCCGGTCGAGATCTTAACCTCGATTTCAACAACCGTCGCCATCATCACCATCTACATGATGTGCGTGGTGGCGAGACTCTCCGTCGGTCCACGCCTATGCGGCGGCTATGCCACCGTTGTACCCATGCGGAGCGAGCATCAGCTAGATTGGACGTAAGAAATAGCCGATCTTCTTCAAACACTGCCAATGCTGCAGAAAATGTAAGCAGTGTAGGGGGTCCTACAGTGATTCGGAATGACAGGTTACCCATATCTGTGGTAAATGCAAGGGCAAGACTCCTTGAGAGGTTGAGTGGGGCACCTCCCTCTAGATACAGAGGCTCTCTAGATATTGATAATATGAGGCATATGCACTACAACGATGAAGACAGGAGCGAATCTTTGACTGCTGGTTTAGCTGGGATCTCCCCACTGACTGACTTAACTTCCCTAATGGAAAGGTCCCAGCTCTTGCAAGAAGTGAACAAAAAGCCACCTGGACTCACTCAGGAGGCTATTAACTGTTTGCACATGGAAATCTTTAGCAGCAGGGAGTCAAGAGTTGAAGAATTTGAATCTAGGGTACCGCAGGATTGTGGCATATGCTTGGAAACTTTTGTGGATGGAGATGAACTTATATGCTTGCCATGCCGTCACAGATTTCACTCTGCTTGTTTGGATCCTTGGGTTCAGAAATGTGGGGACTGTCCATTCTGTAGAAGAGGTATAATTATAGAGTCGCATACGTCTAATTTCTAG 819 0.475 MTSASELFYNRRYRLGRTTNDLGFDSLSGRDLNLDFNNRRHHHHLHDVRGGETLRRSTPMRRLCHRCTHAERASARLDVRNSRSSSNTANAAENVSSVGGPTVIRNDRLPISVVNARARLLERLSGAPPSRYRGSLDIDNMRHMHYNDEDRSESLTAGLAGISPLTDLTSLMERSQLLQEVNKKPPGLTQEAINCLHMEIFSSRESRVEEFESRVPQDCGICLETFVDGDELICLPCRHRFHSACLDPWVQKCGDCPFCRRGIIIESHTSNF 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa01g3707 272 SUPERFAMILY RING/U-box 218 265 - -
Bisa01g3707 272 PANTHER SI:CH211-59O9.10 46 265 - -
Bisa01g3707 272 Pfam Ring finger domain 218 260 IPR001841 -
Bisa01g3707 272 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 174 264 IPR013083 -
Bisa01g3707 272 ProSiteProfiles Zinc finger RING-type profile. 219 260 IPR001841 -
Bisa01g3707 272 SMART ring_2 219 259 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa01g3707 Bisa-ChrBisa01 89153904 89156434 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa01g3707 1 266 C3H Transcription Factor Family AT1G49850 40.520 7.11e-39 134