Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa01g3693 ATGGCTTTGGAGGCTCTGAATTCTCCTACTACACCTGCAGTGTACAAAGAAGATGATGAGCTAGACCTTCAATCTCTGGAGGCCTGGACCAAGGGGAAGCGATCCAAACGACACCGTTTCGACAACAACCAACCTCCTACAGAGGAAGAGTACCTCGCTCTCTGCCTCCTCATGCTCGCTCACGGTGGCACCAACAATACGACGTCGTTGGCGTCATCGCCCACAGGGTTACCACAAGCGGCGTCGTTTTCATCTTCACCCTCCGATCACCCTCTTCCTCCACCTCCGACGATGAAGCAGTCTCAGTCTCATAAGTGCTCTGTCTGCAACAAATCCTTCTCCTCTTACCAAGCTCTCGGCGGTCACAAGGCCAGCCACCGCAAGTCTCCCCCCGAATCCGCCACCGCCGACAACTCCTCCACCTCCACCTCCACCGCCGTAATGGTCACCGGCGGCAAGATGCACGAGTGTTCTATCTGTCACAAGTCCTTCCCCACCGGCCAGGCTCTCGGCGGGCACAAGCGCTGCCACTACGACGGCGGCGGTTCCGGCAACGGCAACAATAGCAGCGGTGCGACAGGTACTACTACTGCTACGACTGCGATTACATCATCGGAGGGAAACACCTCCGCCGCACACAGCCACCGAGGATTTGACTTGAACCTGCCGGCGCCGTTGACCGACTTCTCGCCTGCGGCGGGACTCGGTGTCGCCGTCGTGAAGAATATCAAAAGTGGGGAACAAGAGGTGGAAAGTCCTTTGCCGGTGGCCACCAAGAAGCGTCGCTTGTTTATCGACGAAGACGACGACGACGACGACGACCGTTTACCGTCGTCGGAGAATTGA 846 0.5757 MALEALNSPTTPAVYKEDDELDLQSLEAWTKGKRSKRHRFDNNQPPTEEEYLALCLLMLAHGGTNNTTSLASSPTGLPQAASFSSSPSDHPLPPPPTMKQSQSHKCSVCNKSFSSYQALGGHKASHRKSPPESATADNSSTSTSTAVMVTGGKMHECSICHKSFPTGQALGGHKRCHYDGGGSGNGNNSSGATGTTTATTAITSSEGNTSAAHSHRGFDLNLPAPLTDFSPAAGLGVAVVKNIKSGEQEVESPLPVATKKRRLFIDEDDDDDDDRLPSSEN 281
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Bisa01g3693 281 MobiDBLite consensus disorder prediction 67 104 - -
Bisa01g3693 281 MobiDBLite consensus disorder prediction 119 146 - -
Bisa01g3693 281 SMART c2h2final6 104 126 IPR013087 -
Bisa01g3693 281 SMART c2h2final6 155 177 IPR013087 -
Bisa01g3693 281 Gene3D Classic Zinc Finger 101 177 - -
Bisa01g3693 281 Pfam C2H2-type zinc finger 104 128 - -
Bisa01g3693 281 Pfam C2H2-type zinc finger 155 179 - -
Bisa01g3693 281 MobiDBLite consensus disorder prediction 67 87 - -
Bisa01g3693 281 ProSiteProfiles Zinc finger C2H2 type domain profile. 104 131 IPR013087 -
Bisa01g3693 281 MobiDBLite consensus disorder prediction 131 146 - -
Bisa01g3693 281 MobiDBLite consensus disorder prediction 245 281 - -
Bisa01g3693 281 ProSitePatterns Zinc finger C2H2 type domain signature. 106 126 IPR013087 -
Bisa01g3693 281 ProSiteProfiles Zinc finger C2H2 type domain profile. 155 177 IPR013087 -
Bisa01g3693 281 ProSitePatterns Zinc finger C2H2 type domain signature. 157 177 IPR013087 -
Bisa01g3693 281 PANTHER C2H2 TYPE ZINC FINGER TRANSCRIPTION FACTOR FAMILY-RELATED 35 224 IPR044653 GO:0003700
Bisa01g3693 281 SUPERFAMILY beta-beta-alpha zinc fingers 103 177 IPR036236 -
Bisa01g3693 281 MobiDBLite consensus disorder prediction 267 281 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Bisa01g3693 Bisa-ChrBisa01 88871155 88872000 Dispersed/Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa01g3693 1 264 C2H2 Transcription Factor Family AT1G27730 43.273 1.69e-53 172
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Bisa01g3693 zf-C2H2_6 1.4e-12 CL0361