Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa01g3617 ATGTGCCGCGGCGACGTGCCGTATCCTCTGTGCAGCGAGTGCGTGAACTTCGCTACTCAAAGGATCAGCTCGTCTTGTCCATCGGCGAAGGAAGCCATCATCTGGTACAACGAATGCTTGCTGCGATACTCCTATAGGTTCATCTTCTCGGCAATGGAGGAATATCCTCGGTATCAGATCAAGATTCCACTCGGCGATCCGGCGCTTTTACGCAGTCGTCAATTTTACAGTACGCTGCGATCAATTTCGAACGATCTGATAGATCGAGCAGCCGAGGCGCTTGCGAGATCTGAGAATTCCAAGTACGGCGTTCAGCAAGGCGATGCATCCGACACCACGACGCTGTACGGCCTGGCTCAGTGTACGCCGGACTTGGCCGCCGCCGAGTGTAGACGGTGCGTTGCGGATGCGATTGGGGAAATTACGACATCTTGTTGCGGAGGTAGCATTGGACAGAGTGTGATGTTTCCGAGTTGCTTTGCTAGGTATGAAACGTACCCGTTTTATCAGCATTCCGGCACTTCCACGCCCGCCGAGCCCAACGGAAAAAACAGAAAAATGAGAAAACAAATTATTGCGATACTTGTCGTCTCAATTATCGTTTTGGTGGGGATACTCTTTGTCTGCTACTGTTTGATATGGAGAAAGGCGAGAAAGAAATCACAGAAGGCCATTCTCACAGAAAACTTTGGGGTTGAAATCACTACCTTGGATTCCTTACAATTTGATATGGCTACAATTCAATTAGCGACAAACAAGTTTTCTGAAGAATGCAGGATAGGCAAAGGTGGCTTTGGAGAAGTTTACAAGGGAATTCTTTCTAATGGACAAGAAATAGCTGTGAAGAGACTATCAACAACTTCTACACAAGGAGTTGTAGAATTCAAAAATGAGGTTATGCTAATAGCCAAACTTCAGCATAGAAATTTAGTGAGGCTATTAGGGTTTTGTTTAGAAGAACAAGAGAAGATACTTATCTATGAATATGTGCCTAACAAGAGCCTTAATCACTTTCTATTTGATCCTCTAAAGCAAAGAGAACTAAATTGGATCGAGCGTTTTGAGGTTATAAAAGGAATTGCTCGAGGAATCCTTTATTTGCATGAAGACTCTCGCCTTAAAATCATACACCGTGATCTTAAACCAGGTAATGTTTTATTAGATAGCAACATGAGTCCAAAAATCTCAGATTTTGGTATGGCAAGGATGGTAACAATGGATCAAATTCAAGGAAGTACAAATAGAATTGTTGGAACATATGGTTATATGTCTCCAGAATATGCAATGCATGGACAGTTCTCTGTAAAATCTGATGTTTTTAGTTTTGGAGTCATGGTGCTCGAGATTATCAGCGGAAGAAAAAATTCATGTTCTTATGAATCATGCCGTGTTGATGATCTCTTGAGCTATGTGTTGGAAGATGCACGTCATCCAGTGCAATGTTCACATAAAGCATCTTGCCACCTAAAAGGTTAA 1476 0.4302 MCRGDVPYPLCSECVNFATQRISSSCPSAKEAIIWYNECLLRYSYRFIFSAMEEYPRYQIKIPLGDPALLRSRQFYSTLRSISNDLIDRAAEALARSENSKYGVQQGDASDTTTLYGLAQCTPDLAAAECRRCVADAIGEITTSCCGGSIGQSVMFPSCFARYETYPFYQHSGTSTPAEPNGKNRKMRKQIIAILVVSIIVLVGILFVCYCLIWRKARKKSQKAILTENFGVEITTLDSLQFDMATIQLATNKFSEECRIGKGGFGEVYKGILSNGQEIAVKRLSTTSTQGVVEFKNEVMLIAKLQHRNLVRLLGFCLEEQEKILIYEYVPNKSLNHFLFDPLKQRELNWIERFEVIKGIARGILYLHEDSRLKIIHRDLKPGNVLLDSNMSPKISDFGMARMVTMDQIQGSTNRIVGTYGYMSPEYAMHGQFSVKSDVFSFGVMVLEIISGRKNSCSYESCRVDDLLSYVLEDARHPVQCSHKASCHLKG 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa01g3617 491 ProSiteProfiles Gnk2-homologous domain profile. 1 48 IPR002902 -
Bisa01g3617 491 Gene3D Phosphorylase Kinase; domain 1 214 329 - -
Bisa01g3617 491 SUPERFAMILY Protein kinase-like (PK-like) 236 479 IPR011009 -
Bisa01g3617 491 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 23 215 329 - -
Bisa01g3617 491 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 105 461 - -
Bisa01g3617 491 ProSiteProfiles Protein kinase domain profile. 254 491 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa01g3617 491 CDD STKc_IRAK 260 473 - -
Bisa01g3617 491 Pfam Salt stress response/antifungal 1 44 IPR002902 -
Bisa01g3617 491 Pfam Salt stress response/antifungal 73 166 IPR002902 -
Bisa01g3617 491 FunFam Lectin-domain containing receptor kinase A4.3 330 485 - -
Bisa01g3617 491 Gene3D Transferase(Phosphotransferase) domain 1 330 486 - -
Bisa01g3617 491 ProSitePatterns Protein kinases ATP-binding region signature. 260 282 IPR017441 GO:0005524
Bisa01g3617 491 ProSitePatterns Serine/Threonine protein kinases active-site signature. 375 387 IPR008271 GO:0004672|GO:0006468
Bisa01g3617 491 SMART serkin_6 254 480 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa01g3617 491 Gene3D - 69 168 IPR038408 -
Bisa01g3617 491 Gene3D - 1 47 IPR038408 -
Bisa01g3617 491 Pfam Protein tyrosine and serine/threonine kinase 258 478 IPR001245 GO:0004672|GO:0006468
Bisa01g3617 491 ProSiteProfiles Gnk2-homologous domain profile. 57 168 IPR002902 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa01g3617 Bisa-ChrBisa01 86110915 86116505 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa01g3617 1 471 Receptor kinase-like Gene Family AT4G05200 47.835 1.84e-151 446
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Bisa01g3617 PK_Tyr_Ser-Thr 2.5e-47 CL0016