Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa01g3613 ATGGCACAAGAAAAGACGGATTCTACAACACCACAGTTTCCATTCTTCAATATATCCGCTTTTGAGCAACTGCCAACGACACCACCTCCTTCTTCAACACGAGCAGTAATTTATGCAGGAAAAAGAAGACAACAGATAATAACTATATTCAAGGTCACTGTCCCAGTTGTAATTTCAGTGGTGCTTCTATCAGTGTGCTGCTTCTGTTTTCTGCGAAGAAAAGAAAGAAAGAACCAAGAGGATATTCTCAAAGAAAGCTTTGGAGATGACATTACAACTTTAGAGTCCTTACGATATGATTTAGCCAAAATTGAAGCTGCAACAAACAGGTTTGCTAAAGAAAACATGATAGGAAAAGGTGGATTTGGGGAAGTTTATAAGGGTACTCTTTTAGATGGACAAGAAATAGCAGTGAAAAAGCTTATAGGAAGCTTTGGGCAAGGTGCAGTTGAATTTAAAAATGAAATTCTTGTTATAGCCAAGCTTCAACACAGAAATCTAGTAAGGTTATTGGGATTTTGTCTAGAAGGGGAAGAAAAGATGCTCATCTATGAATATGTGCCTAACAAGAGCCTTGATTATTTTCTATTTGATGCCCAAAAGAGAAGAGAATTATCTTGGTCTGAGCGTTACAAGATAATTGGAGGCATTGCTCGAGGAATTGTTTATCTCTATGAGGATTCTCGTCTTAAAATTATACATCGTGACCTCAAACCTAGTAATGTCTTATTAGATAGTAACATGAATCCAAAAATCTCAGATTTTGGCATGGCAAGAATTGTTTCAACAGATCAAACTGAAGAAAAAACTTGTAGAATTGTTGGCACATATGGTTATATGTCTCCAGAATATGCAATGCAAGGGCAATTTTCTGTAAAATCAGATGTATTTAGTTTTGGAGTCATGGTTCTAGAGATTATTAGTGGGAAGAGGAAAGGTTCTTATGAATCAGAGTGCTTTGATGACATCCGAAGATATGCTTGGACAAAATGGATTGACCAAAAACCATTGGAATTGTTGGATTCAAGTTTAGAAACACCTTATTCTCAAGAAGAAGTCATTAAATGCATCCACATTGGATTATTATGTGTTCAGGAAGATCCAAATGACAGACCTACAATGACAATGGTTATTTTTTACTTGAGTAGCCCCTTGGTCAACTTGCCATCACCACGTGAACCATCATATTTCAGGCATAATCAAGAGCTCATAATACCTAACTTTGACACAACAGGTGATTCTTATTCTATCAATGAAACTAGTGTGACAATCAAGTTCTCCCCTCAGTAA 1290 0.3651 MAQEKTDSTTPQFPFFNISAFEQLPTTPPPSSTRAVIYAGKRRQQIITIFKVTVPVVISVVLLSVCCFCFLRRKERKNQEDILKESFGDDITTLESLRYDLAKIEAATNRFAKENMIGKGGFGEVYKGTLLDGQEIAVKKLIGSFGQGAVEFKNEILVIAKLQHRNLVRLLGFCLEGEEKMLIYEYVPNKSLDYFLFDAQKRRELSWSERYKIIGGIARGIVYLYEDSRLKIIHRDLKPSNVLLDSNMNPKISDFGMARIVSTDQTEEKTCRIVGTYGYMSPEYAMQGQFSVKSDVFSFGVMVLEIISGKRKGSYESECFDDIRRYAWTKWIDQKPLELLDSSLETPYSQEEVIKCIHIGLLCVQEDPNDRPTMTMVIFYLSSPLVNLPSPREPSYFRHNQELIIPNFDTTGDSYSINETSVTIKFSPQ 429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa01g3613 429 SUPERFAMILY Protein kinase-like (PK-like) 97 404 IPR011009 -
Bisa01g3613 429 Gene3D Phosphorylase Kinase; domain 1 72 186 - -
Bisa01g3613 429 SMART serkin_6 111 386 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa01g3613 429 ProSitePatterns Protein kinases ATP-binding region signature. 117 140 IPR017441 GO:0005524
Bisa01g3613 429 ProSiteProfiles Protein kinase domain profile. 111 386 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa01g3613 429 Pfam Protein tyrosine and serine/threonine kinase 114 378 IPR001245 GO:0004672|GO:0006468
Bisa01g3613 429 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 32 422 - -
Bisa01g3613 429 CDD STKc_IRAK 117 381 - -
Bisa01g3613 429 FunFam cysteine-rich receptor-like protein kinase 10 187 388 - -
Bisa01g3613 429 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 23 72 186 - -
Bisa01g3613 429 Gene3D Transferase(Phosphotransferase) domain 1 187 387 - -
Bisa01g3613 429 ProSitePatterns Serine/Threonine protein kinases active-site signature. 232 244 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa01g3613 Bisa-ChrBisa01 85900186 85903290 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa01g3613 40 397 Receptor kinase-like Gene Family AT4G05200 55.000 4.74e-143 422
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Bisa01g3613 PK_Tyr_Ser-Thr 3.1e-48 CL0016