Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa01g3602 ATGGCTTCCCATCATCATCAACCTCTGCTCAACACTCCCAAAAAATCCTCTCTTTCCAAAACCCTCTGGTTATTCCTCTCTGTAGCCACTATCCTAAGCGCTTCAGCCCTCATTGCTTCTTATCTCCACAAACCCACCACCTTCTTCTTCAACCTCTCCCTCCCCAACCACCACCATCTCTGTGATAAAGCCCTCAACAAGCCCTCATGTTTCTCCCACATCTCAGAAATAGCCCCATCTTCTTCAGTCTCCCCTCTCAACCTCCTCCAATCCTTCCTCATCAAATCCACGTCCCACATCGATGAAACTCTTCGCACAGCCAAGGGTTTAAAAAGCCGCGTCAATAGTCCCAGCGAGGAATCCGCCTTGCTTGATTGCGAACAGCTTTTAGACCTGTCCTTGGACAGGACTTGGGACTCTATAATGGCTCTTACTAATAACACCGCAGGGTCGCACCAAGACGCGCACACGTGGCTGAGCTCTGTGCTCACGAGCCATGTGACTTGCCTGGACGGGCTCGACGGGCCGGCTCGAGCCCTGATGGAGGCGGAGCTCGAAGAGTTGATTTCTCGAGCCAGGACCTCTCTAGCCATTCTCGTTGCGGCTGTGCCTGAGGAGGGTGATCGTATTGAGGAGGCGGTGAGGGGGGATTTTCCGGCGTGGGTGAGGAAGGAGGATCGGAGGCTGTTGGAGGCGAGAGGGGCGGCGGTTAAGGCGAATGTGGTGGTGGCGAAGGACGGGAGCGGGAAGTTCAAGACAGTGGCGCAGGCGGTGGCGTCGGCGCCAGACAACGGAAAAGCGAGGTATGTGATTTATATAAAGAGGGGAACGTACAAAGAGAACGTGGAGATTGGGAAAAAGAAGATGAATGTGATGCTCGTCGGCGATGGGATGGACGCCACTATCATCACCGGCAGCTTAAACGTCGTCGACGGATCAACCACCTTCAAGTCCGCCACCGTGGCTGCCGTTGGTGATGGATTTATAGCCCAAGACATCGGGTTCCAAAACACGGCAGGCCCACAGAAGCACCAAGCCGTGGCGCTTCGCGTTGGCGCTGACAAATCCGTCATAAACCGTTGCAAGATCGACGCCTTCCAAGACACTCTCTACGCCCACACCAACAGGCAGTTCTATCGTGACTCCTTTATCACGGGCACCGTCGACTTCATTTTTGGAAACGCCGCGGTCGTGTTCCAAAAGTGCAAACTCGTGGCCCGTAAGCCCATGAGCAACCAGAACAACATGGTCACGGCCCAAGGGCGTGAGGACCCGAATCAGAACACAGGGACTTCCATTCAGCAATGTGACATCATCCCGAGCTCAGACCTAAAGCCTGTGATAGGCTCAATCAAAACCTACTTGGGCCGCCCGTGGAAGCAGTACTCAAGAACCGTGGTGATGCAGTCGTTGTTGAGCAACCACATTGACCCATCAGGATGGGCCCCATGGAGTGGGGATTTTGCATTGAAGACATTGTATTATGGTGAGTATATGAACACAGGCCCAGGGGCTGGGACTAGCAAGAGAGTGAAGTGGCCTGGGTACCATGTGATTACTAGGGCTTCAGACGCTATGAAGTTCACTGTGGCTCAGCTCATTCAGGGTGGGGCTTGGTTGAAGAACACTGGGGTGGCATTCACTGAGGGCCTCTAG 1656 0.5411 MASHHHQPLLNTPKKSSLSKTLWLFLSVATILSASALIASYLHKPTTFFFNLSLPNHHHLCDKALNKPSCFSHISEIAPSSSVSPLNLLQSFLIKSTSHIDETLRTAKGLKSRVNSPSEESALLDCEQLLDLSLDRTWDSIMALTNNTAGSHQDAHTWLSSVLTSHVTCLDGLDGPARALMEAELEELISRARTSLAILVAAVPEEGDRIEEAVRGDFPAWVRKEDRRLLEARGAAVKANVVVAKDGSGKFKTVAQAVASAPDNGKARYVIYIKRGTYKENVEIGKKKMNVMLVGDGMDATIITGSLNVVDGSTTFKSATVAAVGDGFIAQDIGFQNTAGPQKHQAVALRVGADKSVINRCKIDAFQDTLYAHTNRQFYRDSFITGTVDFIFGNAAVVFQKCKLVARKPMSNQNNMVTAQGREDPNQNTGTSIQQCDIIPSSDLKPVIGSIKTYLGRPWKQYSRTVVMQSLLSNHIDPSGWAPWSGDFALKTLYYGEYMNTGPGAGTSKRVKWPGYHVITRASDAMKFTVAQLIQGGAWLKNTGVAFTEGL 551
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa01g3602 551 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 59 198 IPR035513 -
Bisa01g3602 551 Pfam Plant invertase/pectin methylesterase inhibitor 58 192 IPR006501 GO:0004857
Bisa01g3602 551 CDD PMEI-like_4 69 201 - -
Bisa01g3602 551 ProSitePatterns Pectinesterase signature 2. 384 393 IPR033131 -
Bisa01g3602 551 FunFam Pectinesterase 234 551 - -
Bisa01g3602 551 PANTHER PECTINESTERASE 37 541 - -
Bisa01g3602 551 Gene3D - 234 551 IPR012334 -
Bisa01g3602 551 ProSitePatterns Pectinesterase signature 1. 265 284 IPR018040 -
Bisa01g3602 551 Pfam Pectinesterase 240 536 IPR000070 GO:0030599|GO:0042545
Bisa01g3602 551 NCBIfam pectinesterase inhibitor domain 59 177 IPR006501 GO:0004857
Bisa01g3602 551 SMART PMEI_2 50 198 IPR006501 GO:0004857
Bisa01g3602 551 Gene3D Invertase/pectin methylesterase inhibitor family protein 58 201 IPR035513 -
Bisa01g3602 551 SUPERFAMILY Pectin lyase-like 234 550 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa01g3602 Bisa-ChrBisa01 85570288 85573116 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa01g3602 3 551 Carbohydrate Esterase AT1G11580 56.093 0.0 619